Detail information of GWHGAAZE025548


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002285099.10PREDICTED: probable ethanolamine kinase isoform X1 [Vitis vinifera]
COGYP_765700.13E-10hypothetical protein RL0096
Swissprottr|O81024|EKI_ARATH1E-172Probable ethanolamine kinase
trEMBLtr|A5BHH1|A5BHH1_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CAN63497.1}
TAIR10AT2G26830.13E-138Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6307700663088953+
GWHAAZE00000007mRNA6307700663088953+
GWHAAZE00000007exon6307700663077098+
GWHAAZE00000007exon6307725363077284+
GWHAAZE00000007exon6307780263077893+
GWHAAZE00000007exon6307805663078204+
GWHAAZE00000007exon6307905163079156+
GWHAAZE00000007exon6307941363079535+
GWHAAZE00000007exon6307995763080021+
GWHAAZE00000007exon6308093563081055+
GWHAAZE00000007exon6308394963084054+
GWHAAZE00000007exon6308415463084220+
GWHAAZE00000007exon6308725363087345+
GWHAAZE00000007exon6308866263088789+
GWHAAZE00000007exon6308893563088953+
GWHAAZE00000007CDS6307700663077098+
GWHAAZE00000007CDS6307725363077284+
GWHAAZE00000007CDS6307780263077893+
GWHAAZE00000007CDS6307805663078204+
GWHAAZE00000007CDS6307905163079156+
GWHAAZE00000007CDS6307941363079535+
GWHAAZE00000007CDS6307995763080021+
GWHAAZE00000007CDS6308093563081055+
GWHAAZE00000007CDS6308394963084054+
GWHAAZE00000007CDS6308415463084220+
GWHAAZE00000007CDS6308725363087345+
GWHAAZE00000007CDS6308866263088789+
GWHAAZE00000007CDS6308893563088953+
Transcript Sequence

Network for GWHGAAZE025548

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01633.21Choline_kinase1013012.80E-58
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00894ETNK, EKI Metabolic pathways map01100
Glycerophospholipid metabolismmap00564

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.915
SRR3591706second leaf9.898
SRR3591707mature leaf9.632
SRR3591708Shoot apex14.162
SRR3591709Stem12.174
SRR3591710White floral bud27.793
SRR3591711White flower25.453
SRR3591712Green floral bud32.346
SRR3591713Yellow flower35.857
SRP173429 SRR8316895Juvenile bud stage 15.463
SRR8316896Juvenile bud stage 20.897
SRR8316897Juvenile bud stage 13.753
SRR8316894Third green stage 11.723
SRR8316900Third green stage 40.546
SRR8316901Third green stage 35.213
SRR8316898Complete white stage 12.876
SRR8316899Complete white stage 37.156
SRR8316903Complete white stage 24.181
SRR8316902Silver flowering stage16.764
SRR8316904Silver flowering stage29.264
SRR8316905Silver flowering stage9.164
SRR8316906Gold flowering stage 55.133
SRR8316907Gold flowering stage 40.270
SRR8316908Gold flowering stage 71.812
SRP132670SRR6706286Control26.912
SRR6706287Light intensity 50%24.223
SRR6706288Light intensity 20%24.756
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.669
CNS0095593Slightly white alabastrum(diploid) 225.424
CNS0095594Slightly white alabastrum(diploid) 320.145
CNS0095595Whole white alabastrum(diploid) 225.862
CNS0095596Whole white alabastrum(diploid) 334.741
CNS0095597Whole white alabastrum(diploid) 423.605
CNS0095598Silvery flower (diploied) 128.911
CNS0095599Silvery flower (diploied) 222.181
CNS0095600Silvery flower (diploied) 345.989
CNS0095601Golden flower (diploid) 122.831
CNS0095602Golden flower (diploid) 259.205
CNS0095603Golden flower (diploid) 355.181
CNS0095604Slightly white alabastrum(tetraploid) 136.124
CNS0095605Slightly white alabastrum(tetraploid) 230.244
CNS0095606Slightly white alabastrum(tetraploid) 338.848
CNS0095607Whole white alabastrum(tetraploid) 125.644
CNS0095608Whole white alabastrum(tetraploid) 225.239
CNS0095609Whole white alabastrum(tetraploid) 335.928
CNS0095610Silvery flower (tetraploid) 153.766
CNS0095611Silvery flower (tetraploid) 244.545
CNS0095612Silvery flower (tetraploid) 334.538
CNS0095613Golden flower (tetraploid) 187.507
CNS0095614Golden flower (tetraploid) 271.644
CNS0095615Golden flower (tetraploid) 341.431
CRA001975CRR073297Stem 16.640
CRR073298Stem 26.477
CRR073299Stem 33.686
CRR073300Leaf 18.708
CRR073301Leaf 27.485
CRR073302Leaf 36.378
CRR073303Juvenile bud 16.179
CRR073304Juvenile bud 25.323
CRR073305Juvenile bud 35.820
CRR073306Third green 11.251
CRR073307Third green 23.034
CRR073308Third green 31.670
CRR073309Second white 18.081
CRR073310Second white 28.863
CRR073311Second white 39.505
CRR073312Silver flowering 115.232
CRR073313Silver flowering 213.598
CRR073314Silver flowering 314.633
CRR073315Gold flowering 18.900
CRR073316Gold flowering 215.043
CRR073317Gold flowering 37.709
CRR073318Tawny withering 111.089
CRR073319Tawny withering 27.602
CRR073320Tawny withering 36.963