Detail information of GWHGAAZE025607


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP03367.19.3545E-104unnamed protein product [Coffea canephora]
COGYP_003693571.15E-28enoyl-CoA hydratase/isomerase
Swissprottr|Q9T0K7|HIBC6_ARATH6E-1003-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial (Precursor)
trEMBLtr|K7L4V0|K7L4V0_SOYBN2E-104Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G04460.3}
TAIR10AT4G13360.16E-82ATP-dependent caseinolytic (Clp) protease/crotonase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6435300464363172-
GWHAAZE00000007mRNA6435300464363172-
GWHAAZE00000007exon6435300464353129-
GWHAAZE00000007exon6435431164354412-
GWHAAZE00000007exon6435510364355230-
GWHAAZE00000007exon6436076364360922-
GWHAAZE00000007exon6436191464361969-
GWHAAZE00000007exon6436309164363172-
GWHAAZE00000007CDS6436309164363172-
GWHAAZE00000007CDS6436191464361969-
GWHAAZE00000007CDS6436076364360922-
GWHAAZE00000007CDS6435510364355230-
GWHAAZE00000007CDS6435431164354412-
GWHAAZE00000007CDS6435302864353129-
GWHAAZE00000007three_prime_UTR6435300464353027-
Transcript Sequence

Network for GWHGAAZE025607

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16113.6ECH_21452.30E-10
PF16113.6ECH_2471971.20E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05605HIBCH Metabolic pathways map01100
Carbon metabolismmap01200
Propanoate metabolismmap00640
Valine, leucine and isoleucine degradationmap00280
beta-Alanine metabolismmap00410

Gene Ontology

GO term OntologyName
GO:0003860molecular_function3-hydroxyisobutyryl-CoA hydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.153
SRR3591706second leaf9.802
SRR3591707mature leaf9.671
SRR3591708Shoot apex13.216
SRR3591709Stem17.895
SRR3591710White floral bud10.990
SRR3591711White flower11.157
SRR3591712Green floral bud24.406
SRR3591713Yellow flower12.281
SRP173429 SRR8316895Juvenile bud stage 11.935
SRR8316896Juvenile bud stage 19.133
SRR8316897Juvenile bud stage 9.280
SRR8316894Third green stage 7.772
SRR8316900Third green stage 16.988
SRR8316901Third green stage 21.663
SRR8316898Complete white stage 5.091
SRR8316899Complete white stage 15.930
SRR8316903Complete white stage 6.282
SRR8316902Silver flowering stage4.984
SRR8316904Silver flowering stage4.218
SRR8316905Silver flowering stage1.595
SRR8316906Gold flowering stage 9.838
SRR8316907Gold flowering stage 6.241
SRR8316908Gold flowering stage 7.978
SRP132670SRR6706286Control12.656
SRR6706287Light intensity 50%13.283
SRR6706288Light intensity 20%14.120
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.944
CNS0095593Slightly white alabastrum(diploid) 220.095
CNS0095594Slightly white alabastrum(diploid) 317.150
CNS0095595Whole white alabastrum(diploid) 216.352
CNS0095596Whole white alabastrum(diploid) 318.545
CNS0095597Whole white alabastrum(diploid) 416.346
CNS0095598Silvery flower (diploied) 119.658
CNS0095599Silvery flower (diploied) 214.781
CNS0095600Silvery flower (diploied) 38.338
CNS0095601Golden flower (diploid) 113.214
CNS0095602Golden flower (diploid) 210.137
CNS0095603Golden flower (diploid) 38.305
CNS0095604Slightly white alabastrum(tetraploid) 125.088
CNS0095605Slightly white alabastrum(tetraploid) 223.007
CNS0095606Slightly white alabastrum(tetraploid) 322.485
CNS0095607Whole white alabastrum(tetraploid) 123.156
CNS0095608Whole white alabastrum(tetraploid) 222.188
CNS0095609Whole white alabastrum(tetraploid) 322.128
CNS0095610Silvery flower (tetraploid) 117.494
CNS0095611Silvery flower (tetraploid) 213.683
CNS0095612Silvery flower (tetraploid) 313.650
CNS0095613Golden flower (tetraploid) 19.884
CNS0095614Golden flower (tetraploid) 215.837
CNS0095615Golden flower (tetraploid) 34.601
CRA001975CRR073297Stem 114.977
CRR073298Stem 212.794
CRR073299Stem 36.636
CRR073300Leaf 116.738
CRR073301Leaf 211.701
CRR073302Leaf 312.616
CRR073303Juvenile bud 116.629
CRR073304Juvenile bud 27.549
CRR073305Juvenile bud 310.895
CRR073306Third green 10.697
CRR073307Third green 22.998
CRR073308Third green 30.829
CRR073309Second white 14.507
CRR073310Second white 22.849
CRR073311Second white 32.024
CRR073312Silver flowering 14.172
CRR073313Silver flowering 25.723
CRR073314Silver flowering 31.241
CRR073315Gold flowering 110.784
CRR073316Gold flowering 215.676
CRR073317Gold flowering 37.253
CRR073318Tawny withering 111.353
CRR073319Tawny withering 215.237
CRR073320Tawny withering 312.438