Gene detail

Detail information of GWHGAAZE025634

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007204473.1	0	hypothetical protein PRUPE_ppa022204mg [Prunus persica]
COG	NP_108142.1	4E-74	dimethylaniline monooxygenase
Swissprot	tr\|Q9SVQ1\|YUC2_ARATH	0	Indole-3-pyruvate monooxygenase YUCCA2
trEMBL	tr\|M5VW94\|M5VW94_PRUPE	0	Flavin-containing monooxygenase {ECO:0000256\|RuleBase:RU361177}
TAIR10	AT4G13260.1	1E-157	Flavin-binding monooxygenase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	65053999	65057742	+
GWHAAZE00000007	mRNA	65053999	65057742	+
GWHAAZE00000007	exon	65053999	65054688	+
GWHAAZE00000007	exon	65056678	65056926	+
GWHAAZE00000007	exon	65057259	65057381	+
GWHAAZE00000007	exon	65057507	65057742	+
GWHAAZE00000007	CDS	65053999	65054688	+
GWHAAZE00000007	CDS	65056678	65056926	+
GWHAAZE00000007	CDS	65057259	65057381	+
GWHAAZE00000007	CDS	65057507	65057716	+
GWHAAZE00000007	three_prime_UTR	65057717	65057742	+

Transcript Sequence
>GWHTAAZE025668 ATGAACTACGTGAAAGAAATAGAGGGCAAAAAAGTCCATGATCACTTCCAAGAAATGACCACTAACTCGGTACCAAAGTACGTGATTAAAGGCCCGGTCATAGTTGGCGCCGGGCCATCAGGACTAGCGGCAGCTGCTAGTCTCAGAGAAAAAAATATTCCCAATTTGATATTAGAGCGCGCTGATTGTATAGCGTCTCTATGGCAATTAAAGACTTACGACCGCCTCCGCCTCCACCTGCCCAAGCAATTTTGCGAACTTCCATTTATGCCCTTCCCCTCGGACTTCCCCACGTACCCCACTAAGCAACAATTCGTAGCATATCTAGAGGGGTACGCACGTAAATTTGAGATAAAACCCGCTTTTAATGTGAATGTGGTGAGCGCGGAATTCGATCAGGGGTGTGGGATTTGGAAGGTGAGGTGTTGTGTAGGGGTGAAAATGGAGGAGAGAGAGTATTTGTGCAAGTGGTTAATTGTTGCCAGTGGTGAAAATGCAGAGGAGTTGGTACCCAAATTTGAAGGGATGGATGAATTTGTTGGGCCTATTGTTCACACAAGTTCATACAAAAGCGGTGAAGTGTTTAGAGAGAAGAATGTATTGGTTGTTGGTTGCGGGAATTCTGGCATGGAGGTTTGTTTGGACCTTTGTAACTATAATGCCCAACCATCACTTGTGGTTAGAGATTCATTGCATGTACTACCACAAGAGATGCTAGGGAGATCAACATTCGGAGTGTCAATGTGGTTACTCAAGTGGTTACCAATGAGGGTAGTGGACCTTTTCTTACTTGTAATATCACGCCTCGTGATCGGGGATACAAATCATCTTGGACTCATCAGACCAAAGCTTGGTCCCCTCCAACTCAAGACTATTTCTGGAAAGACTCCTGTTCTAGATGTTGGTACCCTTGCCAAGATTAGGACTGGACACATCAAGGTTTTTCCTGGCATAAAGAGGCTGAATTGTGATACGGTGGAGTTTGTAGATGGGAGAGTAGAGAAATTTGATGCGCTCATCTTAGCCACAGGTTATAGAAGTAATGTTCTTAATTGGTTGAAGGAAAACGATTTTTTCTCCGAGAAAAATGGATTTCCCAGGAAACCATTTCCAGGAGGATGGAAAGGTGAGAATGGTTTGTACGCTGTAGGGTTTACCAAGCGGGGCCTACTCGGTACGTCCATGGACGCTAAAAGAATCGCCCAAGATATTGAAGATCAATGGAAACCTGATGCCAAACCCATTAAGTACAACAATGCAGCCTTAGTATAGTCATTGAGTAACATTTAAATTGCGCC

Network for GWHGAAZE025634

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00743.20	FMO-like	33	346	6.00E-24

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K11816	YUCCA	Metabolic pathways	map01100
K11816	YUCCA	Tryptophan metabolism	map00380

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0004499	molecular_function	N,N-dimethylaniline monooxygenase activity
GO:0050660	molecular_function	flavin adenine dinucleotide binding
GO:0050661	molecular_function	NADP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	2.297
	SRR3591707	mature leaf	0.343
	SRR3591708	Shoot apex	1.542
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.096
	SRR3591711	White flower	0.097
	SRR3591712	Green floral bud	1.417
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	1.948
	SRR8316896	Juvenile bud stage	7.205
	SRR8316897	Juvenile bud stage	1.007
	SRR8316894	Third green stage	1.959
	SRR8316900	Third green stage	4.816
	SRR8316901	Third green stage	2.986
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	4.818
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.977
	SRR6706287	Light intensity 50%	1.055
	SRR6706288	Light intensity 20%	1.517
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.578
	CNS0095593	Slightly white alabastrum(diploid) 2	0.172
	CNS0095594	Slightly white alabastrum(diploid) 3	0.976
	CNS0095595	Whole white alabastrum(diploid) 2	0.624
	CNS0095596	Whole white alabastrum(diploid) 3	0.228
	CNS0095597	Whole white alabastrum(diploid) 4	0.276
	CNS0095598	Silvery flower (diploied) 1	0.031
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.129
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.057
	CNS0095603	Golden flower (diploid) 3	0.000
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.892
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.182
	CNS0095606	Slightly white alabastrum(tetraploid) 3	3.829
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.896
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.524
	CNS0095609	Whole white alabastrum(tetraploid) 3	3.815
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.045
CRA001975	CRR073297	Stem 1	0.510
	CRR073298	Stem 2	0.638
	CRR073299	Stem 3	0.917
	CRR073300	Leaf 1	0.898
	CRR073301	Leaf 2	0.655
	CRR073302	Leaf 3	0.031
	CRR073303	Juvenile bud 1	0.161
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.405
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.041
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.059
	CRR073310	Second white 2	0.078
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.081
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.067
	CRR073315	Gold flowering 1	0.010
	CRR073316	Gold flowering 2	0.145
	CRR073317	Gold flowering 3	0.108
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000