Detail information of GWHGAAZE025655


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrADU15551.15.84209E-55MFP [Gossypium hirsutum]
COGNP_519880.12E-16trifunctonal enoyl-CoA hydratase/delta3-cis-delta2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase
Swissprottr|Q9ZPI6|AIM1_ARATH1E-443-hydroxyacyl-CoA dehydrogenase
trEMBLtr|E7CQZ7|E7CQZ7_GOSHI2E-55MFP {ECO:0000313|EMBL:ADU15551.1}
TAIR10AT4G29010.16E-37Enoyl-CoA hydratase/isomerase family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6540478665406550+
GWHAAZE00000007mRNA6540478665406550+
GWHAAZE00000007exon6540478665404924+
GWHAAZE00000007exon6540566865405739+
GWHAAZE00000007exon6540588265405944+
GWHAAZE00000007exon6540606065406116+
GWHAAZE00000007exon6540647165406550+
GWHAAZE00000007CDS6540478665404924+
GWHAAZE00000007CDS6540566865405739+
GWHAAZE00000007CDS6540588265405944+
GWHAAZE00000007CDS6540606065406116+
GWHAAZE00000007CDS6540647165406550+
Transcript Sequence

Network for GWHGAAZE025655

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00378.21ECH_1281346.30E-18
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10527MFP2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fatty acid metabolismmap01212
Fatty acid degradationmap00071
alpha-Linolenic acid metabolismmap00592

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf51.059
SRR3591706second leaf17.644
SRR3591707mature leaf37.922
SRR3591708Shoot apex15.393
SRR3591709Stem45.848
SRR3591710White floral bud166.076
SRR3591711White flower150.981
SRR3591712Green floral bud136.009
SRR3591713Yellow flower212.599
SRP173429 SRR8316895Juvenile bud stage 52.194
SRR8316896Juvenile bud stage 61.464
SRR8316897Juvenile bud stage 40.093
SRR8316894Third green stage 46.007
SRR8316900Third green stage 197.587
SRR8316901Third green stage 188.547
SRR8316898Complete white stage 174.749
SRR8316899Complete white stage 402.761
SRR8316903Complete white stage 267.367
SRR8316902Silver flowering stage99.443
SRR8316904Silver flowering stage164.554
SRR8316905Silver flowering stage95.194
SRR8316906Gold flowering stage 347.111
SRR8316907Gold flowering stage 258.390
SRR8316908Gold flowering stage 319.094
SRP132670SRR6706286Control542.794
SRR6706287Light intensity 50%501.752
SRR6706288Light intensity 20%542.207
CNP0000432CNS0095592Slightly white alabastrum(diploid) 126.568
CNS0095593Slightly white alabastrum(diploid) 223.638
CNS0095594Slightly white alabastrum(diploid) 319.903
CNS0095595Whole white alabastrum(diploid) 233.841
CNS0095596Whole white alabastrum(diploid) 328.669
CNS0095597Whole white alabastrum(diploid) 434.440
CNS0095598Silvery flower (diploied) 164.180
CNS0095599Silvery flower (diploied) 252.310
CNS0095600Silvery flower (diploied) 3363.322
CNS0095601Golden flower (diploid) 178.053
CNS0095602Golden flower (diploid) 2302.172
CNS0095603Golden flower (diploid) 3291.653
CNS0095604Slightly white alabastrum(tetraploid) 165.855
CNS0095605Slightly white alabastrum(tetraploid) 233.132
CNS0095606Slightly white alabastrum(tetraploid) 3215.452
CNS0095607Whole white alabastrum(tetraploid) 121.255
CNS0095608Whole white alabastrum(tetraploid) 229.046
CNS0095609Whole white alabastrum(tetraploid) 3316.516
CNS0095610Silvery flower (tetraploid) 1455.033
CNS0095611Silvery flower (tetraploid) 2515.554
CNS0095612Silvery flower (tetraploid) 3253.672
CNS0095613Golden flower (tetraploid) 1132.233
CNS0095614Golden flower (tetraploid) 2255.928
CNS0095615Golden flower (tetraploid) 3233.162
CRA001975CRR073297Stem 187.318
CRR073298Stem 288.546
CRR073299Stem 367.656
CRR073300Leaf 1239.593
CRR073301Leaf 2149.195
CRR073302Leaf 3194.846
CRR073303Juvenile bud 1280.355
CRR073304Juvenile bud 2326.800
CRR073305Juvenile bud 3361.765
CRR073306Third green 1166.748
CRR073307Third green 2121.199
CRR073308Third green 3118.717
CRR073309Second white 1200.874
CRR073310Second white 2138.057
CRR073311Second white 3142.076
CRR073312Silver flowering 1123.668
CRR073313Silver flowering 2130.306
CRR073314Silver flowering 3111.624
CRR073315Gold flowering 128.703
CRR073316Gold flowering 233.223
CRR073317Gold flowering 326.705
CRR073318Tawny withering 129.905
CRR073319Tawny withering 216.829
CRR073320Tawny withering 325.597