Detail information of GWHGAAZE025658


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI28048.30unnamed protein product [Vitis vinifera]
Swissprottr|Q9SZD1|TCX5_ARATH5E-151Protein tesmin/TSO1-like CXC 5
trEMBLtr|D7TBL3|D7TBL3_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI28048.3}
TAIR10AT4G29000.15E-111Tesmin/TSO1-like CXC domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6550556765513274-
GWHAAZE00000007mRNA6550556765513274-
GWHAAZE00000007exon6551323365513274-
GWHAAZE00000007exon6551280165512911-
GWHAAZE00000007exon6551099565511357-
GWHAAZE00000007exon6551031765510373-
GWHAAZE00000007exon6550999965510096-
GWHAAZE00000007exon6550979665509890-
GWHAAZE00000007exon6550710465507490-
GWHAAZE00000007exon6550556765505950-
GWHAAZE00000007CDS6551323365513274-
GWHAAZE00000007CDS6551280165512911-
GWHAAZE00000007CDS6551099565511357-
GWHAAZE00000007CDS6551031765510373-
GWHAAZE00000007CDS6550999965510096-
GWHAAZE00000007CDS6550979665509890-
GWHAAZE00000007CDS6550710465507490-
GWHAAZE00000007CDS6550579965505950-
GWHAAZE00000007three_prime_UTR6550556765505798-
Transcript Sequence

Network for GWHGAAZE025658

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03638.16TCR65999.30E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyCPP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.404
SRR3591706second leaf2.530
SRR3591707mature leaf4.298
SRR3591708Shoot apex8.109
SRR3591709Stem5.229
SRR3591710White floral bud5.510
SRR3591711White flower6.787
SRR3591712Green floral bud6.378
SRR3591713Yellow flower5.176
SRP173429 SRR8316895Juvenile bud stage 3.085
SRR8316896Juvenile bud stage 5.025
SRR8316897Juvenile bud stage 2.312
SRR8316894Third green stage 1.797
SRR8316900Third green stage 5.160
SRR8316901Third green stage 5.461
SRR8316898Complete white stage 1.564
SRR8316899Complete white stage 6.756
SRR8316903Complete white stage 3.038
SRR8316902Silver flowering stage1.491
SRR8316904Silver flowering stage1.981
SRR8316905Silver flowering stage0.672
SRR8316906Gold flowering stage 3.029
SRR8316907Gold flowering stage 2.968
SRR8316908Gold flowering stage 3.056
SRP132670SRR6706286Control5.609
SRR6706287Light intensity 50%5.594
SRR6706288Light intensity 20%5.371
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.788
CNS0095593Slightly white alabastrum(diploid) 22.976
CNS0095594Slightly white alabastrum(diploid) 33.394
CNS0095595Whole white alabastrum(diploid) 23.364
CNS0095596Whole white alabastrum(diploid) 33.146
CNS0095597Whole white alabastrum(diploid) 44.298
CNS0095598Silvery flower (diploied) 12.825
CNS0095599Silvery flower (diploied) 22.808
CNS0095600Silvery flower (diploied) 33.603
CNS0095601Golden flower (diploid) 13.232
CNS0095602Golden flower (diploid) 25.727
CNS0095603Golden flower (diploid) 34.301
CNS0095604Slightly white alabastrum(tetraploid) 12.727
CNS0095605Slightly white alabastrum(tetraploid) 23.517
CNS0095606Slightly white alabastrum(tetraploid) 35.277
CNS0095607Whole white alabastrum(tetraploid) 12.035
CNS0095608Whole white alabastrum(tetraploid) 22.889
CNS0095609Whole white alabastrum(tetraploid) 33.941
CNS0095610Silvery flower (tetraploid) 12.573
CNS0095611Silvery flower (tetraploid) 22.004
CNS0095612Silvery flower (tetraploid) 33.257
CNS0095613Golden flower (tetraploid) 11.656
CNS0095614Golden flower (tetraploid) 22.803
CNS0095615Golden flower (tetraploid) 32.480
CRA001975CRR073297Stem 110.235
CRR073298Stem 28.336
CRR073299Stem 310.130
CRR073300Leaf 19.077
CRR073301Leaf 29.068
CRR073302Leaf 37.600
CRR073303Juvenile bud 18.222
CRR073304Juvenile bud 26.087
CRR073305Juvenile bud 39.114
CRR073306Third green 11.301
CRR073307Third green 21.921
CRR073308Third green 31.795
CRR073309Second white 13.661
CRR073310Second white 24.312
CRR073311Second white 34.936
CRR073312Silver flowering 13.927
CRR073313Silver flowering 24.132
CRR073314Silver flowering 34.591
CRR073315Gold flowering 15.580
CRR073316Gold flowering 26.431
CRR073317Gold flowering 35.458
CRR073318Tawny withering 18.160
CRR073319Tawny withering 28.636
CRR073320Tawny withering 36.781