Detail information of GWHGAAZE025687


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283979.10PREDICTED: ninja-family protein mc410 isoform X1 [Vitis vinifera]
Swissprottr|Q53HY2|NINJA_TOBAC6E-180Ninja-family protein mc410
trEMBLtr|F6HH03|F6HH03_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB51499.1}
TAIR10AT4G28910.38E-77novel interactor of JAZ

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6595105865953897-
GWHAAZE00000007mRNA6595105865953897-
GWHAAZE00000007exon6595105865951566-
GWHAAZE00000007exon6595287165953897-
GWHAAZE00000007CDS6595287165953897-
GWHAAZE00000007CDS6595105865951566-
Transcript Sequence

Network for GWHGAAZE025687

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16135.6TDBD4654861.80E-05
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf32.226
SRR3591706second leaf29.279
SRR3591707mature leaf48.676
SRR3591708Shoot apex39.983
SRR3591709Stem42.539
SRR3591710White floral bud57.451
SRR3591711White flower52.601
SRR3591712Green floral bud42.248
SRR3591713Yellow flower53.230
SRP173429 SRR8316895Juvenile bud stage 26.759
SRR8316896Juvenile bud stage 34.024
SRR8316897Juvenile bud stage 15.552
SRR8316894Third green stage 13.085
SRR8316900Third green stage 32.309
SRR8316901Third green stage 31.632
SRR8316898Complete white stage 16.488
SRR8316899Complete white stage 92.086
SRR8316903Complete white stage 30.194
SRR8316902Silver flowering stage21.040
SRR8316904Silver flowering stage24.920
SRR8316905Silver flowering stage14.029
SRR8316906Gold flowering stage 52.434
SRR8316907Gold flowering stage 49.888
SRR8316908Gold flowering stage 49.866
SRP132670SRR6706286Control34.360
SRR6706287Light intensity 50%32.634
SRR6706288Light intensity 20%33.370
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.774
CNS0095593Slightly white alabastrum(diploid) 219.609
CNS0095594Slightly white alabastrum(diploid) 319.923
CNS0095595Whole white alabastrum(diploid) 221.641
CNS0095596Whole white alabastrum(diploid) 315.191
CNS0095597Whole white alabastrum(diploid) 422.156
CNS0095598Silvery flower (diploied) 144.545
CNS0095599Silvery flower (diploied) 231.665
CNS0095600Silvery flower (diploied) 347.484
CNS0095601Golden flower (diploid) 130.250
CNS0095602Golden flower (diploid) 258.900
CNS0095603Golden flower (diploid) 358.189
CNS0095604Slightly white alabastrum(tetraploid) 123.709
CNS0095605Slightly white alabastrum(tetraploid) 219.965
CNS0095606Slightly white alabastrum(tetraploid) 344.409
CNS0095607Whole white alabastrum(tetraploid) 117.987
CNS0095608Whole white alabastrum(tetraploid) 217.991
CNS0095609Whole white alabastrum(tetraploid) 326.744
CNS0095610Silvery flower (tetraploid) 147.838
CNS0095611Silvery flower (tetraploid) 249.257
CNS0095612Silvery flower (tetraploid) 363.565
CNS0095613Golden flower (tetraploid) 131.479
CNS0095614Golden flower (tetraploid) 248.512
CNS0095615Golden flower (tetraploid) 363.080
CRA001975CRR073297Stem 147.155
CRR073298Stem 241.377
CRR073299Stem 351.084
CRR073300Leaf 137.154
CRR073301Leaf 233.245
CRR073302Leaf 334.749
CRR073303Juvenile bud 129.795
CRR073304Juvenile bud 240.964
CRR073305Juvenile bud 339.337
CRR073306Third green 136.373
CRR073307Third green 230.151
CRR073308Third green 337.119
CRR073309Second white 130.673
CRR073310Second white 242.289
CRR073311Second white 338.239
CRR073312Silver flowering 134.016
CRR073313Silver flowering 229.327
CRR073314Silver flowering 332.005
CRR073315Gold flowering 121.295
CRR073316Gold flowering 232.506
CRR073317Gold flowering 322.008
CRR073318Tawny withering 144.859
CRR073319Tawny withering 238.629
CRR073320Tawny withering 334.834