Detail information of GWHGAAZE025688


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP40412.14.7803E-177hypothetical protein JCGZ_03762 [Jatropha curcas]
COGYP_001369863.11E-91ubiquinone/menaquinone biosynthesis methyltransferase
Swissprottr|Q9LVC8|COQ5_ARATH2E-1592-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (Precursor)
trEMBLtr|A0A067KW81|A0A067KW81_JATCU2E-177Uncharacterized protein {ECO:0000313|EMBL:KDP40412.1}
TAIR10AT5G57300.33E-127S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6596417165970381-
GWHAAZE00000007mRNA6596417165970381-
GWHAAZE00000007exon6597028565970381-
GWHAAZE00000007exon6597012165970186-
GWHAAZE00000007exon6596923565969394-
GWHAAZE00000007exon6596906665969127-
GWHAAZE00000007exon6596782465967982-
GWHAAZE00000007exon6596729865967442-
GWHAAZE00000007exon6596564165965712-
GWHAAZE00000007exon6596493065965038-
GWHAAZE00000007exon6596417165964272-
GWHAAZE00000007CDS6597028565970381-
GWHAAZE00000007CDS6597012165970186-
GWHAAZE00000007CDS6596923565969394-
GWHAAZE00000007CDS6596906665969127-
GWHAAZE00000007CDS6596782465967982-
GWHAAZE00000007CDS6596729865967442-
GWHAAZE00000007CDS6596564165965712-
GWHAAZE00000007CDS6596493065965038-
GWHAAZE00000007CDS6596417165964272-
Transcript Sequence

Network for GWHGAAZE025688

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01209.19Ubie_methyltran743221.20E-85
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06127COQ5 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName
GO:0008168molecular_functionmethyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf34.967
SRR3591706second leaf23.632
SRR3591707mature leaf17.232
SRR3591708Shoot apex28.506
SRR3591709Stem28.658
SRR3591710White floral bud34.043
SRR3591711White flower45.433
SRR3591712Green floral bud30.092
SRR3591713Yellow flower51.018
SRP173429 SRR8316895Juvenile bud stage 13.013
SRR8316896Juvenile bud stage 28.291
SRR8316897Juvenile bud stage 14.616
SRR8316894Third green stage 9.583
SRR8316900Third green stage 36.014
SRR8316901Third green stage 36.392
SRR8316898Complete white stage 8.981
SRR8316899Complete white stage 32.603
SRR8316903Complete white stage 11.518
SRR8316902Silver flowering stage8.079
SRR8316904Silver flowering stage9.048
SRR8316905Silver flowering stage3.996
SRR8316906Gold flowering stage 16.786
SRR8316907Gold flowering stage 16.731
SRR8316908Gold flowering stage 16.508
SRP132670SRR6706286Control26.979
SRR6706287Light intensity 50%29.754
SRR6706288Light intensity 20%27.572
CNP0000432CNS0095592Slightly white alabastrum(diploid) 122.789
CNS0095593Slightly white alabastrum(diploid) 220.697
CNS0095594Slightly white alabastrum(diploid) 323.829
CNS0095595Whole white alabastrum(diploid) 223.482
CNS0095596Whole white alabastrum(diploid) 332.089
CNS0095597Whole white alabastrum(diploid) 425.185
CNS0095598Silvery flower (diploied) 19.570
CNS0095599Silvery flower (diploied) 211.286
CNS0095600Silvery flower (diploied) 311.208
CNS0095601Golden flower (diploid) 18.682
CNS0095602Golden flower (diploid) 28.877
CNS0095603Golden flower (diploid) 38.039
CNS0095604Slightly white alabastrum(tetraploid) 133.456
CNS0095605Slightly white alabastrum(tetraploid) 228.809
CNS0095606Slightly white alabastrum(tetraploid) 325.682
CNS0095607Whole white alabastrum(tetraploid) 133.190
CNS0095608Whole white alabastrum(tetraploid) 240.974
CNS0095609Whole white alabastrum(tetraploid) 341.208
CNS0095610Silvery flower (tetraploid) 113.370
CNS0095611Silvery flower (tetraploid) 213.149
CNS0095612Silvery flower (tetraploid) 318.074
CNS0095613Golden flower (tetraploid) 17.672
CNS0095614Golden flower (tetraploid) 214.575
CNS0095615Golden flower (tetraploid) 38.823
CRA001975CRR073297Stem 116.938
CRR073298Stem 214.398
CRR073299Stem 313.451
CRR073300Leaf 120.665
CRR073301Leaf 217.635
CRR073302Leaf 323.668
CRR073303Juvenile bud 123.011
CRR073304Juvenile bud 219.277
CRR073305Juvenile bud 315.797
CRR073306Third green 16.049
CRR073307Third green 29.283
CRR073308Third green 34.374
CRR073309Second white 16.123
CRR073310Second white 26.990
CRR073311Second white 35.287
CRR073312Silver flowering 110.092
CRR073313Silver flowering 27.165
CRR073314Silver flowering 35.018
CRR073315Gold flowering 112.390
CRR073316Gold flowering 212.094
CRR073317Gold flowering 37.487
CRR073318Tawny withering 113.709
CRR073319Tawny withering 215.503
CRR073320Tawny withering 312.867