Detail information of GWHGAAZE025814


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAIU48757.11.83589E-06nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein, partial [Sarcandra glabra]
Swissprottr|Q8RUF8|NILP3_ARATH0.0000003Omega-amidase,chloroplastic (Precursor)
trEMBLtr|A0A097PL52|A0A097PL52_9MAGN0.0000007Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein {ECO:0000313|EMBL:AIU48757.1} (Fragment)
TAIR10AT5G12040.10.000003Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6827010668270552+
GWHAAZE00000007mRNA6827010668270552+
GWHAAZE00000007exon6827010668270232+
GWHAAZE00000007exon6827044068270552+
GWHAAZE00000007CDS6827010668270232+
GWHAAZE00000007CDS6827044068270552+
Transcript Sequence

Network for GWHGAAZE025814

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13566NIT2, yafV Metabolic pathways map01100
Alanine, aspartate and glutamate metabolismmap00250

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf3.827
SRR3591706second leaf4.143
SRR3591707mature leaf3.274
SRR3591708Shoot apex6.651
SRR3591709Stem2.674
SRR3591710White floral bud2.588
SRR3591711White flower1.907
SRR3591712Green floral bud2.785
SRR3591713Yellow flower1.033
SRP173429 SRR8316895Juvenile bud stage 3.896
SRR8316896Juvenile bud stage 5.170
SRR8316897Juvenile bud stage 3.407
SRR8316894Third green stage 2.036
SRR8316900Third green stage 4.630
SRR8316901Third green stage 5.390
SRR8316898Complete white stage 0.959
SRR8316899Complete white stage 5.241
SRR8316903Complete white stage 1.247
SRR8316902Silver flowering stage0.566
SRR8316904Silver flowering stage0.643
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 1.908
SRR8316907Gold flowering stage 1.004
SRR8316908Gold flowering stage 0.318
SRP132670SRR6706286Control3.693
SRR6706287Light intensity 50%3.796
SRR6706288Light intensity 20%4.145
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.992
CNS0095593Slightly white alabastrum(diploid) 29.358
CNS0095594Slightly white alabastrum(diploid) 33.829
CNS0095595Whole white alabastrum(diploid) 26.351
CNS0095596Whole white alabastrum(diploid) 36.402
CNS0095597Whole white alabastrum(diploid) 45.226
CNS0095598Silvery flower (diploied) 11.983
CNS0095599Silvery flower (diploied) 23.330
CNS0095600Silvery flower (diploied) 31.968
CNS0095601Golden flower (diploid) 13.885
CNS0095602Golden flower (diploid) 21.825
CNS0095603Golden flower (diploid) 31.255
CNS0095604Slightly white alabastrum(tetraploid) 16.218
CNS0095605Slightly white alabastrum(tetraploid) 27.479
CNS0095606Slightly white alabastrum(tetraploid) 35.682
CNS0095607Whole white alabastrum(tetraploid) 13.031
CNS0095608Whole white alabastrum(tetraploid) 25.098
CNS0095609Whole white alabastrum(tetraploid) 37.428
CNS0095610Silvery flower (tetraploid) 10.937
CNS0095611Silvery flower (tetraploid) 22.212
CNS0095612Silvery flower (tetraploid) 31.496
CNS0095613Golden flower (tetraploid) 10.727
CNS0095614Golden flower (tetraploid) 20.480
CNS0095615Golden flower (tetraploid) 30.101
CRA001975CRR073297Stem 13.864
CRR073298Stem 25.222
CRR073299Stem 30.903
CRR073300Leaf 13.766
CRR073301Leaf 23.329
CRR073302Leaf 31.588
CRR073303Juvenile bud 11.344
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.763
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.179
CRR073309Second white 10.000
CRR073310Second white 20.479
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.457
CRR073316Gold flowering 21.392
CRR073317Gold flowering 30.000
CRR073318Tawny withering 11.657
CRR073319Tawny withering 21.955
CRR073320Tawny withering 30.586