Gene detail

Detail information of GWHGAAZE025865

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011094017.1	0	PREDICTED: probable flavin-containing monooxygenase 1 [Sesamum indicum]
COG	YP_007059321.1	8E-71	K+ transport protein
Swissprot	tr\|Q9LMA1\|FMO1_ARATH	0	Probable flavin-containing monooxygenase 1
trEMBL	tr\|K4CEA4\|K4CEA4_SOLLC	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Solyc07g042430.1.1}
TAIR10	AT1G19250.1	0	flavin-dependent monooxygenase 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	69172808	69175861	+
GWHAAZE00000007	mRNA	69172808	69175861	+
GWHAAZE00000007	exon	69172808	69173245	+
GWHAAZE00000007	exon	69173563	69173803	+
GWHAAZE00000007	exon	69174889	69175067	+
GWHAAZE00000007	exon	69175145	69175861	+
GWHAAZE00000007	CDS	69172808	69173245	+
GWHAAZE00000007	CDS	69173563	69173803	+
GWHAAZE00000007	CDS	69174889	69175067	+
GWHAAZE00000007	CDS	69175145	69175861	+

Transcript Sequence
>GWHTAAZE025899 ATGGCTACCACAATTACATCTAAAATTGGGATAATTGGAGCTGGGATAAGCGGTATAGCCGCTGCCAAACAGCTCTCCGAACACAGTCCCATAATCTTTGAGGCCACGGAATCCATCGGAGGGGTGTGGAAACACTGTTCTTTTAGGTCCACTAAACTCCAAACCCCTCGTTGCGATTACGAGTTCTCAGATTTCCCTTGGACCCAACGAGATAATTCAAGTTTCCCCTCTTATAAGGAGATCTTGGATTATCTCTATTCTTATGCTGATCACTTTGATGTGTTGAAGTTTGTCAAGTTCAACTCAAAGGTGGTGGAAATCCGGTTCGTTGGTGACCGGGACCCCGCCGATCTTAAGGTGGGAGAATACGGAAGTTTGTTGACTGGAAAACCTGTTTGGGAGGTTGCTGTCCTGACGGGCTCATCGGAGACTCTTCAGTGGTATGCATTTGAATTTCTTGTGGTTTGCACGGGAAAGTACGGAGACATACCAAAAATACCAGACTTTCCACTTAACAAAGGGCCGGAAGTATTTGGAGGAAAGGTATTGCACTCTCTTGACTATAGCAAAATGAATGAAGAAGAAACTACTCAACTGCTTAAAGGGAAGAAGGTGGTTATTATTGGCTACAAGAAATCTGCTATTGATTTGGCTGTTGAGTGCGCTGAAGCTAATCAAGGACCGGAAGGGAAGGCATGTACCATGGTGGTAAGGACTTTGCACTGGACAGTGCCTCATTACTCCATATGGGGTTTGCCATTTTACTTGTTCTATTCAACAAGATCCTCCCAATTCCTCCATCAAAGGCCTAACCAAGGCCTCCTAAGGACCCTCCTTTGCCACCTTGCTTCTCCTATGAGACGGGCGGTTTCGAAAATTATTGAGTCGTATTTGGTATATAAGCTTCCATTGGAGAAGTACGGATTGAAACCTGATCACCCTTTCGAGGAAGACTACGCTTCTTGTCAAATGGCTATATTGCCAGACAATTTCTTCACCGAAGCGGACAAGGGTAATATAAAGTTCAAAAGGGCATCAAAATGGTGGTTTTGGGAAGGAGGAGTCAAATTCGAAGATAACAACAAGTTGGAAGCTGATGTGGTTGTTCTCTCCACCGGTTACGATGCCAAGAAAAAGCTCAAGGCTATATTACCCGAGCCATTTCGCAGTTTGACAGAGTTTCCATCTGGGAATATGCTCTTGTATAGGGGTACGATTCATCCGTTTATTCCAAGCATGGCTTTTGTGGGGTACGTGGAGAGTGTTTCGAATTTGCATACCGCAGAGATACGTTGCAAATGGCTGAGCCGGCTCGTAAATGATCGATTTAAGCTGCCAAGTGTGGAGAGAATGCTTGAACAAACAACCAAGGAGATGGAAATCATGAGGAGGACAACTAGGTTCTACAAGAGGAATTGTATTTCTACATTCAGTATCAACCACAGTGACGAAATTTGCGAGGAGATGGGATGGAGCTCTTGGAGGAAGAAGAATTGGTTGGCTGAAGCTTTTAGCCCTTACAACAGCCAAGACTATGAAGAAGAAGAAGAAGAGGGGAAAATAATAAGAGGGTAG

Network for GWHGAAZE025865

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00743.20	FMO-like	8	490	3.90E-38

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00485	FMO	Drug metabolism - cytochrome P450	map00982

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016491	molecular_function	oxidoreductase activity
GO:0004499	molecular_function	N,N-dimethylaniline monooxygenase activity
GO:0050660	molecular_function	flavin adenine dinucleotide binding
GO:0050661	molecular_function	NADP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.170
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.005
	SRR3591710	White floral bud	0.193
	SRR3591711	White flower	0.725
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.203
SRP173429	SRR8316895	Juvenile bud stage	0.164
	SRR8316896	Juvenile bud stage	0.130
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.082
	SRR8316898	Complete white stage	0.205
	SRR8316899	Complete white stage	0.066
	SRR8316903	Complete white stage	0.198
	SRR8316902	Silver flowering stage	0.300
	SRR8316904	Silver flowering stage	0.369
	SRR8316905	Silver flowering stage	1.454
	SRR8316906	Gold flowering stage	1.103
	SRR8316907	Gold flowering stage	1.727
	SRR8316908	Gold flowering stage	1.062
SRP132670	SRR6706286	Control	1.105
	SRR6706287	Light intensity 50%	0.371
	SRR6706288	Light intensity 20%	0.252
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.024
	CNS0095597	Whole white alabastrum(diploid) 4	0.082
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.465
	CNS0095601	Golden flower (diploid) 1	0.093
	CNS0095602	Golden flower (diploid) 2	0.155
	CNS0095603	Golden flower (diploid) 3	0.113
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.056
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.051
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.032
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.135
	CNS0095611	Silvery flower (tetraploid) 2	0.257
	CNS0095612	Silvery flower (tetraploid) 3	0.226
	CNS0095613	Golden flower (tetraploid) 1	0.149
	CNS0095614	Golden flower (tetraploid) 2	0.258
	CNS0095615	Golden flower (tetraploid) 3	0.031
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.005
	CRR073300	Leaf 1	0.002
	CRR073301	Leaf 2	0.001
	CRR073302	Leaf 3	0.002
	CRR073303	Juvenile bud 1	0.125
	CRR073304	Juvenile bud 2	0.410
	CRR073305	Juvenile bud 3	0.072
	CRR073306	Third green 1	0.833
	CRR073307	Third green 2	0.025
	CRR073308	Third green 3	0.099
	CRR073309	Second white 1	0.157
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.109
	CRR073314	Silver flowering 3	0.002
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.713
	CRR073318	Tawny withering 1	2.422
	CRR073319	Tawny withering 2	5.203
	CRR073320	Tawny withering 3	0.106