Detail information of GWHGAAZE025897


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010249491.12.72373E-67PREDICTED: auxin-responsive protein IAA26-like [Nelumbo nucifera]
Swissprottr|Q8LAL2|IAA26_ARATH8E-65Auxin-responsive protein IAA26
trEMBLtr|B9GXF5|B9GXF5_POPTR6E-67Auxin-responsive protein {ECO:0000256|RuleBase:RU004549}
TAIR10AT3G16500.13E-53phytochrome-associated protein 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6979228569796229-
GWHAAZE00000007mRNA6979228569796229-
GWHAAZE00000007exon6979616569796229-
GWHAAZE00000007exon6979330369793577-
GWHAAZE00000007exon6979268569792838-
GWHAAZE00000007exon6979246769792531-
GWHAAZE00000007exon6979228569792346-
GWHAAZE00000007CDS6979616569796229-
GWHAAZE00000007CDS6979330369793577-
GWHAAZE00000007CDS6979268569792838-
GWHAAZE00000007CDS6979246769792531-
GWHAAZE00000007CDS6979228569792346-
Transcript Sequence

Network for GWHGAAZE025897

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02309.17AUX_IAA121853.30E-62
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAUX/IAA

KEGG pathway

KO Enzyme pathway mapID
K14484IAA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf50.741
SRR3591706second leaf9.170
SRR3591707mature leaf9.182
SRR3591708Shoot apex37.887
SRR3591709Stem68.634
SRR3591710White floral bud10.894
SRR3591711White flower27.971
SRR3591712Green floral bud3.230
SRR3591713Yellow flower4.067
SRP173429 SRR8316895Juvenile bud stage 1.767
SRR8316896Juvenile bud stage 2.404
SRR8316897Juvenile bud stage 1.114
SRR8316894Third green stage 0.957
SRR8316900Third green stage 1.302
SRR8316901Third green stage 1.055
SRR8316898Complete white stage 0.562
SRR8316899Complete white stage 4.274
SRR8316903Complete white stage 2.133
SRR8316902Silver flowering stage3.206
SRR8316904Silver flowering stage3.441
SRR8316905Silver flowering stage1.181
SRR8316906Gold flowering stage 5.088
SRR8316907Gold flowering stage 10.206
SRR8316908Gold flowering stage 9.969
SRP132670SRR6706286Control2.698
SRR6706287Light intensity 50%1.996
SRR6706288Light intensity 20%3.083
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.940
CNS0095593Slightly white alabastrum(diploid) 23.317
CNS0095594Slightly white alabastrum(diploid) 31.019
CNS0095595Whole white alabastrum(diploid) 21.688
CNS0095596Whole white alabastrum(diploid) 30.661
CNS0095597Whole white alabastrum(diploid) 41.137
CNS0095598Silvery flower (diploied) 17.585
CNS0095599Silvery flower (diploied) 25.708
CNS0095600Silvery flower (diploied) 38.387
CNS0095601Golden flower (diploid) 16.353
CNS0095602Golden flower (diploid) 23.535
CNS0095603Golden flower (diploid) 32.817
CNS0095604Slightly white alabastrum(tetraploid) 11.367
CNS0095605Slightly white alabastrum(tetraploid) 21.239
CNS0095606Slightly white alabastrum(tetraploid) 32.068
CNS0095607Whole white alabastrum(tetraploid) 11.332
CNS0095608Whole white alabastrum(tetraploid) 20.068
CNS0095609Whole white alabastrum(tetraploid) 32.885
CNS0095610Silvery flower (tetraploid) 14.339
CNS0095611Silvery flower (tetraploid) 23.509
CNS0095612Silvery flower (tetraploid) 33.517
CNS0095613Golden flower (tetraploid) 11.404
CNS0095614Golden flower (tetraploid) 22.104
CNS0095615Golden flower (tetraploid) 31.630
CRA001975CRR073297Stem 17.377
CRR073298Stem 25.194
CRR073299Stem 38.289
CRR073300Leaf 12.129
CRR073301Leaf 22.123
CRR073302Leaf 32.428
CRR073303Juvenile bud 12.783
CRR073304Juvenile bud 21.923
CRR073305Juvenile bud 32.114
CRR073306Third green 10.287
CRR073307Third green 20.315
CRR073308Third green 30.827
CRR073309Second white 10.229
CRR073310Second white 21.675
CRR073311Second white 30.803
CRR073312Silver flowering 10.185
CRR073313Silver flowering 21.611
CRR073314Silver flowering 31.078
CRR073315Gold flowering 13.696
CRR073316Gold flowering 25.610
CRR073317Gold flowering 32.084
CRR073318Tawny withering 119.107
CRR073319Tawny withering 211.173
CRR073320Tawny withering 328.765