Detail information of GWHGAAZE025906


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283717.30PREDICTED: homeobox-leucine zipper protein ATHB-15 [Vitis vinifera]
Swissprottr|Q9ZU11|ATB15_ARATH0Homeobox-leucine zipper protein ATHB-15
trEMBLtr|F6H3C8|F6H3C8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB46692.1}
TAIR10AT1G52150.20Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6998493569994511-
GWHAAZE00000007mRNA6998493569994511-
GWHAAZE00000007exon6998493569984946-
GWHAAZE00000007exon6998528869985368-
GWHAAZE00000007exon6998611969986268-
GWHAAZE00000007exon6998684469986949-
GWHAAZE00000007exon6998738669987720-
GWHAAZE00000007exon6998820269988336-
GWHAAZE00000007exon6998898369989063-
GWHAAZE00000007exon6998924669989392-
GWHAAZE00000007exon6999011869990310-
GWHAAZE00000007exon6999039269990498-
GWHAAZE00000007exon6999066569990739-
GWHAAZE00000007exon6999083969990994-
GWHAAZE00000007exon6999148969991572-
GWHAAZE00000007exon6999167269991785-
GWHAAZE00000007exon6999187369991968-
GWHAAZE00000007exon6999339269993482-
GWHAAZE00000007exon6999363669993736-
GWHAAZE00000007exon6999402269994181-
GWHAAZE00000007exon6999429769994511-
GWHAAZE00000007CDS6999429769994511-
GWHAAZE00000007CDS6999402269994181-
GWHAAZE00000007CDS6999363669993736-
GWHAAZE00000007CDS6999339269993482-
GWHAAZE00000007CDS6999187369991968-
GWHAAZE00000007CDS6999167269991785-
GWHAAZE00000007CDS6999148969991572-
GWHAAZE00000007CDS6999083969990994-
GWHAAZE00000007CDS6999066569990739-
GWHAAZE00000007CDS6999039269990498-
GWHAAZE00000007CDS6999011869990310-
GWHAAZE00000007CDS6998924669989392-
GWHAAZE00000007CDS6998898369989063-
GWHAAZE00000007CDS6998820269988336-
GWHAAZE00000007CDS6998738669987720-
GWHAAZE00000007CDS6998684469986949-
GWHAAZE00000007CDS6998611969986268-
GWHAAZE00000007CDS6998528869985368-
GWHAAZE00000007CDS6998493569984946-
Transcript Sequence

Network for GWHGAAZE025906

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00046.30Homeodomain19779.40E-17
PF01852.20START1633716.60E-55
PF08670.12MEKHLA6878093.30E-41
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyHB-HD-ZIP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677molecular_functionDNA binding
GO:0008289molecular_functionlipid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.881
SRR3591706second leaf12.145
SRR3591707mature leaf6.689
SRR3591708Shoot apex25.154
SRR3591709Stem37.465
SRR3591710White floral bud2.477
SRR3591711White flower5.278
SRR3591712Green floral bud4.618
SRR3591713Yellow flower1.216
SRP173429 SRR8316895Juvenile bud stage 4.082
SRR8316896Juvenile bud stage 5.202
SRR8316897Juvenile bud stage 2.151
SRR8316894Third green stage 2.074
SRR8316900Third green stage 1.519
SRR8316901Third green stage 1.845
SRR8316898Complete white stage 0.161
SRR8316899Complete white stage 2.940
SRR8316903Complete white stage 0.417
SRR8316902Silver flowering stage0.049
SRR8316904Silver flowering stage0.080
SRR8316905Silver flowering stage0.045
SRR8316906Gold flowering stage 0.299
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.404
SRP132670SRR6706286Control1.787
SRR6706287Light intensity 50%2.222
SRR6706288Light intensity 20%1.863
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.385
CNS0095593Slightly white alabastrum(diploid) 24.784
CNS0095594Slightly white alabastrum(diploid) 33.750
CNS0095595Whole white alabastrum(diploid) 21.426
CNS0095596Whole white alabastrum(diploid) 31.365
CNS0095597Whole white alabastrum(diploid) 41.542
CNS0095598Silvery flower (diploied) 11.905
CNS0095599Silvery flower (diploied) 21.748
CNS0095600Silvery flower (diploied) 30.964
CNS0095601Golden flower (diploid) 10.987
CNS0095602Golden flower (diploid) 21.488
CNS0095603Golden flower (diploid) 31.529
CNS0095604Slightly white alabastrum(tetraploid) 16.281
CNS0095605Slightly white alabastrum(tetraploid) 23.912
CNS0095606Slightly white alabastrum(tetraploid) 314.329
CNS0095607Whole white alabastrum(tetraploid) 12.047
CNS0095608Whole white alabastrum(tetraploid) 20.795
CNS0095609Whole white alabastrum(tetraploid) 32.238
CNS0095610Silvery flower (tetraploid) 10.967
CNS0095611Silvery flower (tetraploid) 21.040
CNS0095612Silvery flower (tetraploid) 30.644
CNS0095613Golden flower (tetraploid) 10.157
CNS0095614Golden flower (tetraploid) 20.695
CNS0095615Golden flower (tetraploid) 30.272
CRA001975CRR073297Stem 19.525
CRR073298Stem 28.724
CRR073299Stem 316.104
CRR073300Leaf 17.256
CRR073301Leaf 25.148
CRR073302Leaf 33.415
CRR073303Juvenile bud 12.506
CRR073304Juvenile bud 20.988
CRR073305Juvenile bud 32.798
CRR073306Third green 10.166
CRR073307Third green 20.444
CRR073308Third green 30.262
CRR073309Second white 10.075
CRR073310Second white 20.000
CRR073311Second white 30.118
CRR073312Silver flowering 10.111
CRR073313Silver flowering 20.151
CRR073314Silver flowering 30.160
CRR073315Gold flowering 11.550
CRR073316Gold flowering 23.606
CRR073317Gold flowering 32.576
CRR073318Tawny withering 122.760
CRR073319Tawny withering 214.158
CRR073320Tawny withering 328.850