Detail information of GWHGAAZE025941


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004501180.14.145E-107PREDICTED: protein PEROXIN-4-like [Cicer arietinum]
COGYP_008797956.13E-10ubiquitin-conjugating enzyme E2-like protein
Swissprottr|Q8LGF7|PEX4_ARATH1E-106Protein PEROXIN-4
trEMBLtr|I3SC14|I3SC14_LOTJA8E-107Uncharacterized protein {ECO:0000313|EMBL:AFK37806.1}
TAIR10AT5G25760.26E-84peroxin4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7054859270550940-
GWHAAZE00000007mRNA7054859270550940-
GWHAAZE00000007exon7055093570550940-
GWHAAZE00000007exon7055028570550404-
GWHAAZE00000007exon7055009070550218-
GWHAAZE00000007exon7054934470549405-
GWHAAZE00000007exon7054900070549142-
GWHAAZE00000007exon7054859270548680-
GWHAAZE00000007CDS7055093570550940-
GWHAAZE00000007CDS7055028570550404-
GWHAAZE00000007CDS7055009070550218-
GWHAAZE00000007CDS7054934470549405-
GWHAAZE00000007CDS7054900070549142-
GWHAAZE00000007CDS7054859270548680-
Transcript Sequence

Network for GWHGAAZE025941

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00179.27UQ_con7854.70E-25
PF00179.27UQ_con1101721.20E-14
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyUBC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf50.619
SRR3591706second leaf19.333
SRR3591707mature leaf24.776
SRR3591708Shoot apex30.207
SRR3591709Stem64.485
SRR3591710White floral bud55.114
SRR3591711White flower57.549
SRR3591712Green floral bud41.806
SRR3591713Yellow flower64.609
SRP173429 SRR8316895Juvenile bud stage 21.119
SRR8316896Juvenile bud stage 31.937
SRR8316897Juvenile bud stage 15.984
SRR8316894Third green stage 14.509
SRR8316900Third green stage 44.186
SRR8316901Third green stage 49.520
SRR8316898Complete white stage 33.731
SRR8316899Complete white stage 67.104
SRR8316903Complete white stage 36.742
SRR8316902Silver flowering stage28.642
SRR8316904Silver flowering stage31.954
SRR8316905Silver flowering stage16.827
SRR8316906Gold flowering stage 61.677
SRR8316907Gold flowering stage 63.555
SRR8316908Gold flowering stage 59.517
SRP132670SRR6706286Control39.615
SRR6706287Light intensity 50%40.517
SRR6706288Light intensity 20%44.528
CNP0000432CNS0095592Slightly white alabastrum(diploid) 140.987
CNS0095593Slightly white alabastrum(diploid) 242.454
CNS0095594Slightly white alabastrum(diploid) 343.539
CNS0095595Whole white alabastrum(diploid) 231.989
CNS0095596Whole white alabastrum(diploid) 329.806
CNS0095597Whole white alabastrum(diploid) 432.450
CNS0095598Silvery flower (diploied) 142.116
CNS0095599Silvery flower (diploied) 238.071
CNS0095600Silvery flower (diploied) 353.086
CNS0095601Golden flower (diploid) 146.943
CNS0095602Golden flower (diploid) 258.640
CNS0095603Golden flower (diploid) 349.605
CNS0095604Slightly white alabastrum(tetraploid) 140.197
CNS0095605Slightly white alabastrum(tetraploid) 237.031
CNS0095606Slightly white alabastrum(tetraploid) 354.132
CNS0095607Whole white alabastrum(tetraploid) 130.785
CNS0095608Whole white alabastrum(tetraploid) 232.560
CNS0095609Whole white alabastrum(tetraploid) 341.558
CNS0095610Silvery flower (tetraploid) 168.845
CNS0095611Silvery flower (tetraploid) 262.647
CNS0095612Silvery flower (tetraploid) 371.297
CNS0095613Golden flower (tetraploid) 164.960
CNS0095614Golden flower (tetraploid) 268.179
CNS0095615Golden flower (tetraploid) 356.613
CRA001975CRR073297Stem 137.901
CRR073298Stem 232.940
CRR073299Stem 329.805
CRR073300Leaf 142.274
CRR073301Leaf 236.132
CRR073302Leaf 335.677
CRR073303Juvenile bud 136.295
CRR073304Juvenile bud 240.696
CRR073305Juvenile bud 342.439
CRR073306Third green 132.068
CRR073307Third green 236.554
CRR073308Third green 331.628
CRR073309Second white 140.454
CRR073310Second white 235.353
CRR073311Second white 322.548
CRR073312Silver flowering 126.426
CRR073313Silver flowering 219.369
CRR073314Silver flowering 318.080
CRR073315Gold flowering 114.837
CRR073316Gold flowering 218.230
CRR073317Gold flowering 315.697
CRR073318Tawny withering 133.252
CRR073319Tawny withering 224.529
CRR073320Tawny withering 326.429