Gene detail

Detail information of GWHGAAZE026047

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU20253.1	4.01692E-79	hypothetical protein MIMGU_mgv1a013550mg [Erythranthe guttata]
COG	YP_007097641.1	1E-20	F0F1-type ATP synthase, beta subunit
Swissprot	tr\|P31853\|ATPX_SPIOL	9E-74	ATP synthase subunit b', chloroplastic (Precursor)
trEMBL	tr\|A0A022PZD4\|A0A022PZD4_ERYGU	1E-79	Uncharacterized protein {ECO:0000313\|EMBL:EYU20253.1}
TAIR10	AT4G32260.1	6E-37	ATPase, F0 complex, subunit B/B', bacterial/chloroplast

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	72398828	72401181	-
GWHAAZE00000007	mRNA	72398828	72401181	-
GWHAAZE00000007	exon	72398828	72399091	-
GWHAAZE00000007	exon	72400786	72401181	-
GWHAAZE00000007	CDS	72400786	72401181	-
GWHAAZE00000007	CDS	72398828	72399091	-

Transcript Sequence
>GWHTAAZE026081 ATGGCCACCATCAACATGAACATGATGGCCTCCTCCTCCAAAACCCTAATCACCTCTTCCTCCCTCCCCAAACTCCCCCCAAACTCCCCAAAACTCCCCCAACTCTCATCTCTCCCCAAAAAAAAAAACAAATTCCTATCTCTAACCCAACTCCCCACCTCAATAGCCGCCGCCGTCGCCTCCACGATGGCAGCGCCACTGCCGCTACTGGCCGAAGAAATCGAGAAGGCTCAACTATTCGACTTCGATCTGACACTGCCGATAATGATGGCTGAATTTTTAATACTAATGGTAGCACTAGACAAGCTCTACTACACCCCCGTCGGTAAATTCATGGACGAGAGGGATGCCGCTATTAAGGAGAAGCTTAGCAGCGTCAAGGATACCTCCGCCGAGGTCAAGAAGCTAGAGGAGGAGGCCACAGCCAAGATGAGGGCTGCAAGGGCAGAGATAGCGGCGGCGCTAAACAAGATGAAGGCGGAGGCGTCGGCAGTGGTGGAGGAGAAGCTGGAGGAGGGGAGGACGAAGCTAGAGGCAGAGTTGGCAGAGGCTCTGGCGAACTTGGAGAAGCAAAAGGAGGCGACCATGAAATCACTTGATGCTCAGATTTCTGCTCTTAGTGATGAAATTGTCAAGAAGGTTCTTCCTGCTGCAAAATAA

Network for GWHGAAZE026047

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00430.19	ATP-synt_B	85	215	1.30E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K02109	ATPF0B, atpF	Metabolic pathways	map01100
		Oxidative phosphorylation	map00190
		Photosynthesis	map00195

Gene Ontology

GO term	Ontology	Name
GO:0015986	biological_process	ATP synthesis coupled proton transport
GO:0045263	cellular_component	proton-transporting ATP synthase complex, coupling factor F(o)
GO:0015078	molecular_function	proton transmembrane transporter activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	180.155
	SRR3591706	second leaf	980.126
	SRR3591707	mature leaf	1348.536
	SRR3591708	Shoot apex	332.076
	SRR3591709	Stem	160.754
	SRR3591710	White floral bud	51.905
	SRR3591711	White flower	53.178
	SRR3591712	Green floral bud	57.240
	SRR3591713	Yellow flower	39.447
SRP173429	SRR8316895	Juvenile bud stage	121.733
	SRR8316896	Juvenile bud stage	126.938
	SRR8316897	Juvenile bud stage	89.707
	SRR8316894	Third green stage	55.890
	SRR8316900	Third green stage	136.943
	SRR8316901	Third green stage	138.136
	SRR8316898	Complete white stage	32.381
	SRR8316899	Complete white stage	110.277
	SRR8316903	Complete white stage	49.690
	SRR8316902	Silver flowering stage	34.918
	SRR8316904	Silver flowering stage	32.468
	SRR8316905	Silver flowering stage	20.819
	SRR8316906	Gold flowering stage	54.628
	SRR8316907	Gold flowering stage	52.365
	SRR8316908	Gold flowering stage	50.121
SRP132670	SRR6706286	Control	212.721
	SRR6706287	Light intensity 50%	177.880
	SRR6706288	Light intensity 20%	184.345
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	120.377
	CNS0095593	Slightly white alabastrum(diploid) 2	94.659
	CNS0095594	Slightly white alabastrum(diploid) 3	107.447
	CNS0095595	Whole white alabastrum(diploid) 2	104.882
	CNS0095596	Whole white alabastrum(diploid) 3	94.769
	CNS0095597	Whole white alabastrum(diploid) 4	85.132
	CNS0095598	Silvery flower (diploied) 1	116.793
	CNS0095599	Silvery flower (diploied) 2	116.247
	CNS0095600	Silvery flower (diploied) 3	42.247
	CNS0095601	Golden flower (diploid) 1	145.675
	CNS0095602	Golden flower (diploid) 2	70.547
	CNS0095603	Golden flower (diploid) 3	68.394
	CNS0095604	Slightly white alabastrum(tetraploid) 1	87.195
	CNS0095605	Slightly white alabastrum(tetraploid) 2	100.292
	CNS0095606	Slightly white alabastrum(tetraploid) 3	122.589
	CNS0095607	Whole white alabastrum(tetraploid) 1	66.305
	CNS0095608	Whole white alabastrum(tetraploid) 2	69.150
	CNS0095609	Whole white alabastrum(tetraploid) 3	87.828
	CNS0095610	Silvery flower (tetraploid) 1	49.471
	CNS0095611	Silvery flower (tetraploid) 2	53.473
	CNS0095612	Silvery flower (tetraploid) 3	32.980
	CNS0095613	Golden flower (tetraploid) 1	39.114
	CNS0095614	Golden flower (tetraploid) 2	42.245
	CNS0095615	Golden flower (tetraploid) 3	34.416
CRA001975	CRR073297	Stem 1	209.880
	CRR073298	Stem 2	187.428
	CRR073299	Stem 3	250.602
	CRR073300	Leaf 1	106.866
	CRR073301	Leaf 2	133.265
	CRR073302	Leaf 3	121.218
	CRR073303	Juvenile bud 1	120.590
	CRR073304	Juvenile bud 2	121.576
	CRR073305	Juvenile bud 3	120.092
	CRR073306	Third green 1	107.725
	CRR073307	Third green 2	76.261
	CRR073308	Third green 3	74.837
	CRR073309	Second white 1	71.208
	CRR073310	Second white 2	49.345
	CRR073311	Second white 3	24.850
	CRR073312	Silver flowering 1	24.961
	CRR073313	Silver flowering 2	25.085
	CRR073314	Silver flowering 3	18.912
	CRR073315	Gold flowering 1	2059.766
	CRR073316	Gold flowering 2	1945.383
	CRR073317	Gold flowering 3	1424.972
	CRR073318	Tawny withering 1	117.633
	CRR073319	Tawny withering 2	138.550
	CRR073320	Tawny withering 3	96.410