Detail information of GWHGAAZE026148


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006385135.13.78216E-12hypothetical protein POPTR_0004s24220g [Populus trichocarpa]
trEMBLtr|U5GNQ2|U5GNQ2_POPTR1E-12Uncharacterized protein {ECO:0000313|EMBL:ERP62932.1}
TAIR10AT5G26670.20.000000009Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7429041874290919-
GWHAAZE00000007mRNA7429041874290919-
GWHAAZE00000007exon7429072574290919-
GWHAAZE00000007exon7429041874290561-
GWHAAZE00000007CDS7429072574290919-
GWHAAZE00000007CDS7429041874290561-
Transcript Sequence

Network for GWHGAAZE026148

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03283.14PAE9802.40E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19882NOTUM Wnt signaling pathway map04310

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.278
SRR3591706second leaf0.000
SRR3591707mature leaf0.000
SRR3591708Shoot apex0.213
SRR3591709Stem0.000
SRR3591710White floral bud1.763
SRR3591711White flower0.676
SRR3591712Green floral bud2.282
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.865
SRR8316896Juvenile bud stage 2.703
SRR8316897Juvenile bud stage 0.117
SRR8316894Third green stage 0.673
SRR8316900Third green stage 1.762
SRR8316901Third green stage 1.695
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 2.924
SRR8316903Complete white stage 0.160
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.168
SRP132670SRR6706286Control1.217
SRR6706287Light intensity 50%1.013
SRR6706288Light intensity 20%1.493
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.143
CNS0095593Slightly white alabastrum(diploid) 25.847
CNS0095594Slightly white alabastrum(diploid) 37.484
CNS0095595Whole white alabastrum(diploid) 24.814
CNS0095596Whole white alabastrum(diploid) 312.345
CNS0095597Whole white alabastrum(diploid) 47.040
CNS0095598Silvery flower (diploied) 10.360
CNS0095599Silvery flower (diploied) 20.120
CNS0095600Silvery flower (diploied) 30.525
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.006
CNS0095603Golden flower (diploid) 30.000
CNS0095604Slightly white alabastrum(tetraploid) 17.905
CNS0095605Slightly white alabastrum(tetraploid) 210.091
CNS0095606Slightly white alabastrum(tetraploid) 311.555
CNS0095607Whole white alabastrum(tetraploid) 110.908
CNS0095608Whole white alabastrum(tetraploid) 23.528
CNS0095609Whole white alabastrum(tetraploid) 35.706
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.839
CNS0095612Silvery flower (tetraploid) 30.215
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.680
CRR073298Stem 21.496
CRR073299Stem 31.976
CRR073300Leaf 13.135
CRR073301Leaf 20.649
CRR073302Leaf 31.722
CRR073303Juvenile bud 12.843
CRR073304Juvenile bud 20.123
CRR073305Juvenile bud 32.489
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.226
CRR073309Second white 10.145
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000