Detail information of GWHGAAZE026191


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrACF05806.11.4566E-157PAE [Litchi chinensis]
trEMBLtr|B3V945|B3V945_LITCN5E-158PAE {ECO:0000313|EMBL:ACF05806.1}
TAIR10AT4G19420.13E-119Pectinacetylesterase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7515987875164073-
GWHAAZE00000007mRNA7515987875164073-
GWHAAZE00000007exon7515987875160045-
GWHAAZE00000007exon7516024975160403-
GWHAAZE00000007exon7516052775160632-
GWHAAZE00000007exon7516073875160815-
GWHAAZE00000007exon7516090675160959-
GWHAAZE00000007exon7516131675161376-
GWHAAZE00000007exon7516149275161616-
GWHAAZE00000007exon7516175975161845-
GWHAAZE00000007exon7516235475162433-
GWHAAZE00000007exon7516253875162664-
GWHAAZE00000007exon7516341375163495-
GWHAAZE00000007exon7516393875164073-
GWHAAZE00000007CDS7516393875164073-
GWHAAZE00000007CDS7516341375163495-
GWHAAZE00000007CDS7516253875162664-
GWHAAZE00000007CDS7516235475162433-
GWHAAZE00000007CDS7516175975161845-
GWHAAZE00000007CDS7516149275161616-
GWHAAZE00000007CDS7516131675161376-
GWHAAZE00000007CDS7516090675160959-
GWHAAZE00000007CDS7516073875160815-
GWHAAZE00000007CDS7516052775160632-
GWHAAZE00000007CDS7516024975160403-
GWHAAZE00000007CDS7515987875160045-
Transcript Sequence

Network for GWHGAAZE026191

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03283.14PAE303781.30E-142
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19882NOTUM Wnt signaling pathway map04310

Gene Ontology

GO term OntologyName
GO:0016787molecular_functionhydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf41.390
SRR3591706second leaf5.011
SRR3591707mature leaf1.937
SRR3591708Shoot apex19.358
SRR3591709Stem25.121
SRR3591710White floral bud24.327
SRR3591711White flower11.334
SRR3591712Green floral bud29.112
SRR3591713Yellow flower5.397
SRP173429 SRR8316895Juvenile bud stage 10.605
SRR8316896Juvenile bud stage 12.339
SRR8316897Juvenile bud stage 8.978
SRR8316894Third green stage 6.077
SRR8316900Third green stage 23.177
SRR8316901Third green stage 20.050
SRR8316898Complete white stage 11.515
SRR8316899Complete white stage 33.354
SRR8316903Complete white stage 19.949
SRR8316902Silver flowering stage2.937
SRR8316904Silver flowering stage3.007
SRR8316905Silver flowering stage1.065
SRR8316906Gold flowering stage 2.787
SRR8316907Gold flowering stage 2.414
SRR8316908Gold flowering stage 5.212
SRP132670SRR6706286Control31.611
SRR6706287Light intensity 50%32.430
SRR6706288Light intensity 20%34.198
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.425
CNS0095593Slightly white alabastrum(diploid) 219.783
CNS0095594Slightly white alabastrum(diploid) 312.566
CNS0095595Whole white alabastrum(diploid) 215.745
CNS0095596Whole white alabastrum(diploid) 310.350
CNS0095597Whole white alabastrum(diploid) 413.235
CNS0095598Silvery flower (diploied) 110.866
CNS0095599Silvery flower (diploied) 24.394
CNS0095600Silvery flower (diploied) 37.717
CNS0095601Golden flower (diploid) 14.920
CNS0095602Golden flower (diploid) 24.760
CNS0095603Golden flower (diploid) 35.209
CNS0095604Slightly white alabastrum(tetraploid) 118.695
CNS0095605Slightly white alabastrum(tetraploid) 217.923
CNS0095606Slightly white alabastrum(tetraploid) 347.162
CNS0095607Whole white alabastrum(tetraploid) 17.079
CNS0095608Whole white alabastrum(tetraploid) 29.656
CNS0095609Whole white alabastrum(tetraploid) 327.059
CNS0095610Silvery flower (tetraploid) 110.883
CNS0095611Silvery flower (tetraploid) 28.185
CNS0095612Silvery flower (tetraploid) 37.083
CNS0095613Golden flower (tetraploid) 17.818
CNS0095614Golden flower (tetraploid) 26.857
CNS0095615Golden flower (tetraploid) 34.892
CRA001975CRR073297Stem 118.313
CRR073298Stem 215.458
CRR073299Stem 314.021
CRR073300Leaf 131.047
CRR073301Leaf 224.109
CRR073302Leaf 326.424
CRR073303Juvenile bud 129.867
CRR073304Juvenile bud 226.025
CRR073305Juvenile bud 329.293
CRR073306Third green 12.845
CRR073307Third green 23.806
CRR073308Third green 33.890
CRR073309Second white 10.292
CRR073310Second white 20.629
CRR073311Second white 30.524
CRR073312Silver flowering 10.147
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.091
CRR073316Gold flowering 21.036
CRR073317Gold flowering 30.480
CRR073318Tawny withering 17.776
CRR073319Tawny withering 25.914
CRR073320Tawny withering 39.845