Detail information of GWHGAAZE026206


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010648452.13.61652E-46PREDICTED: L-arabinokinase-like [Vitis vinifera]
Swissprottr|O23461|ARAK_ARATH6E-41L-arabinokinase
trEMBLtr|D7SU50|D7SU50_VITVI1E-46Putative uncharacterized protein {ECO:0000313|EMBL:CBI20799.3}
TAIR10AT4G16130.16E-36arabinose kinase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7542140375422820+
GWHAAZE00000007mRNA7542140375422820+
GWHAAZE00000007exon7542140375421528+
GWHAAZE00000007exon7542266575422820+
GWHAAZE00000007CDS7542140375421528+
GWHAAZE00000007CDS7542266575422820+
Transcript Sequence

Network for GWHGAAZE026206

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12446E2.7.1.46 Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf10.183
SRR3591706second leaf10.563
SRR3591707mature leaf16.941
SRR3591708Shoot apex8.868
SRR3591709Stem15.615
SRR3591710White floral bud11.905
SRR3591711White flower17.785
SRR3591712Green floral bud6.393
SRR3591713Yellow flower22.368
SRP173429 SRR8316895Juvenile bud stage 12.509
SRR8316896Juvenile bud stage 13.054
SRR8316897Juvenile bud stage 6.132
SRR8316894Third green stage 3.970
SRR8316900Third green stage 10.082
SRR8316901Third green stage 12.357
SRR8316898Complete white stage 8.587
SRR8316899Complete white stage 14.808
SRR8316903Complete white stage 11.864
SRR8316902Silver flowering stage6.516
SRR8316904Silver flowering stage14.772
SRR8316905Silver flowering stage6.199
SRR8316906Gold flowering stage 26.839
SRR8316907Gold flowering stage 19.565
SRR8316908Gold flowering stage 15.337
SRP132670SRR6706286Control16.575
SRR6706287Light intensity 50%16.807
SRR6706288Light intensity 20%17.160
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.182
CNS0095593Slightly white alabastrum(diploid) 22.186
CNS0095594Slightly white alabastrum(diploid) 32.609
CNS0095595Whole white alabastrum(diploid) 26.710
CNS0095596Whole white alabastrum(diploid) 33.467
CNS0095597Whole white alabastrum(diploid) 45.412
CNS0095598Silvery flower (diploied) 110.247
CNS0095599Silvery flower (diploied) 211.135
CNS0095600Silvery flower (diploied) 339.543
CNS0095601Golden flower (diploid) 112.190
CNS0095602Golden flower (diploid) 232.359
CNS0095603Golden flower (diploid) 328.523
CNS0095604Slightly white alabastrum(tetraploid) 15.683
CNS0095605Slightly white alabastrum(tetraploid) 23.227
CNS0095606Slightly white alabastrum(tetraploid) 312.896
CNS0095607Whole white alabastrum(tetraploid) 12.943
CNS0095608Whole white alabastrum(tetraploid) 23.942
CNS0095609Whole white alabastrum(tetraploid) 310.993
CNS0095610Silvery flower (tetraploid) 136.567
CNS0095611Silvery flower (tetraploid) 239.864
CNS0095612Silvery flower (tetraploid) 334.252
CNS0095613Golden flower (tetraploid) 118.454
CNS0095614Golden flower (tetraploid) 228.316
CNS0095615Golden flower (tetraploid) 334.016
CRA001975CRR073297Stem 117.301
CRR073298Stem 215.340
CRR073299Stem 317.410
CRR073300Leaf 112.463
CRR073301Leaf 217.677
CRR073302Leaf 314.957
CRR073303Juvenile bud 112.218
CRR073304Juvenile bud 212.556
CRR073305Juvenile bud 315.595
CRR073306Third green 15.600
CRR073307Third green 26.361
CRR073308Third green 38.621
CRR073309Second white 113.427
CRR073310Second white 29.115
CRR073311Second white 320.133
CRR073312Silver flowering 18.296
CRR073313Silver flowering 24.958
CRR073314Silver flowering 310.996
CRR073315Gold flowering 18.810
CRR073316Gold flowering 213.354
CRR073317Gold flowering 38.905
CRR073318Tawny withering 111.062
CRR073319Tawny withering 27.844
CRR073320Tawny withering 34.777