Gene detail

Detail information of GWHGAAZE026269

Functional Annotation

Database	Orthologs	Annotation
Nr	XP_008439282.1	PREDICTED: heat shock protein 83 [Cucumis melo]
COG	YP_003956340.1	chaperone protein HtpG
Swissprot	tr\|P51819\|HSP83_IPONI	Heat shock protein 83
trEMBL	tr\|A0A0A0L6P6\|A0A0A0L6P6_CUCSA	Uncharacterized protein {ECO:0000313\|EMBL:KGN57413.1}
TAIR10	AT5G52640.1	heat shock protein 90.1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	1678985	1682481	-
GWHAAZE00000008	mRNA	1678985	1682481	-
GWHAAZE00000008	exon	1678985	1680538	-
GWHAAZE00000008	exon	1681016	1681296	-
GWHAAZE00000008	exon	1682217	1682481	-
GWHAAZE00000008	CDS	1682217	1682481	-
GWHAAZE00000008	CDS	1681016	1681296	-
GWHAAZE00000008	CDS	1678985	1680538	-

Transcript Sequence
>GWHTAAZE026303 ATGGCGGACGGTGAGACATTTGCGTTTCAGGCTGAGATCAACCAGCTATTGAGCTTGATTATAAACACGTTCTACAGCAACAAGGAGATATTCCTTCGGGAACTCATAAGCAATTCCTCTGATGCTTTGGACAAGATACGGTTCGAGAGCTTGACCGATAAGTCTAAGCTCGATGGTCAGCCTGAGCTCTTTATAAGGATTGTACCTGATAAGGTTAATAAAACCCTATCCATCATCGATAGTGGTATTGGAATGACCAAAGCAGATTTGGTGAACAATTTGGGGACAATTGCGAGATCTGGGACGAAGGAATTCATGGAGGCATTACAAGCAGGTGCTGATGTGAGCATGATTGGGCAGTTTGGTGTGGGATTCTACTCTGCATACCTTGTTGCAGAGAGGGTTATTGTAACCACTAAGCACAATGATGATGAGCAGTACATCTGGGAATCTCAAGCTGGTGGTTCATTCACGGTTACGAGGGATGTTAATGGAGAGCAACTTGGCCGAGGAACAAAGATCACCCTTTTCCTCAAGGAGGATCAGTTGGAGTATTTAGAGGAAAGGAGAATTAAGGACCTGGTGAAGAAGCACTCTGAATTTATTAGCTATCCAATCTATCTCTGGACTGAGAAGACAACAGAGAAAGAGATCAGTGATGATGAAGATGAAGAACCCAAGAAGGAAGAAGAGGGTGATATCGAGGAAGTCGATGAGGAGAAAGAGAAGGACAAATCAAAGAAGAAGAAAATCAAGGAGGTTTCTCACGAGTGGCAGCTCATTAACAAGCAGAAACCCATATGGCTCCGCAAGCCAGAGGAGATCACGAAGGATGAATATGCTTCATTCTACAAGAGCTTGACCAATGATTGGGAAGATCATCTTGCTGTCAAGCACTTCTCTGTTGAAGGCCAGCTTGAATTCAAAGCCATCCTCTTTGTTCCAAAGAGAGCTCCGTTTGATCTCTTTGATACCCGCAAGAAGATGAACAACATTAAGCTCTACGTTCGAAGGGTGTTCATAATGGACAATTGCGAAGAATTGATCCCTGAGTACCTTGGATTTGTGAAGGGTGTGGTGGACTCTGATGACTTGCCACTGAACATTTCTCGTGAGATGCTGCAACAGAACAAGATTCTAAAGGTTATCCGTAAGAATCTTGTGAAGAAATGCATTGAGATGTTCAATGAGATAGCGGAGAATAAGGAAGATTATAACAAGTTTTATGAAGCTTTTTCCAAGAATTTGAAATTGGGTATCCATGAGGACAGCCAGAACAGGGCAAAACTAGCTGATTTGCTTCGTTACCACTCAACAAAGAGCGGTGATGAGCTGACTAGCTTGAAGGATTATGTCACAAGAATGAAGGAGGGGCAAAAGGACATCTACTACATAACTGGTGAGAGTAAGAAGGCAGTTGAGAATTCGCCCTTCTTAGAGCGGCTTAAGAAGAAGGGATACGAGGTTCTTTTCATGGTAGATGCCATAGACGAATATGCGGTTGGACAGTTGAAAGAGTACGATGGAAAGAAACTGGTTTCTGCAACAAAAGAAGGATTGAAACTTGATGACGAAACTGAGGAAGAAAAGAAGAAAAGAGAGGAGAAAAAGAATTCCTTTGAAAATCTTTGCAAGACGATGAAGGAAATCCTTGGGGACAGAGTTGAGAAAGTGGTGGTTTCTGATAGAATCGTGGATTCTCCATGTTGTTTGGTAACAGGCGAATACGGGTGGACTGCGAACATGGAGAGGATAATGAAGGCACAGGCGTTGAGGGATAGTAGCATGGGGTCATACATGTCTAGCAAGAAGACAATGGAGATAAATCCAGATAATGGGATTATGGAGGAGCTGAGGAAGAGAGCCGAGGCTGATAAGAACGATAAGTCGGTGAAGGATTTAGTGCTGCTGCTTTTTGAGACAGCTTTGCTGACTTCTGGGTTTAGCTTGGAGGAGCCTAATACTTTTGCAGGGAGGATTCATAGGATGTTGAAATTGGGTTTGAGTATTGATGAAGAGGAAGAGGGTGGGGAGGATGTTGATATGCCTGCACTTGAGGAAGCTGATAATGAAGAGAGCAAGATGGAGGAAGTTGACTGA

Network for GWHGAAZE026269

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02518.27	HATPase_c	27	181	8.60E-15
PF00183.19	HSP90	184	694	1.00E-235

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K04079	HSP90A, htpG	Protein processing in endoplasmic reticulum	map04141
		PI3K-Akt signaling pathway	map04151
		Necroptosis	map04217
		NOD-like receptor signaling pathway	map04621
		Antigen processing and presentation	map04612
		Th17 cell differentiation	map04659
		IL-17 signaling pathway	map04657
		Estrogen signaling pathway	map04915
		Progesterone-mediated oocyte maturation	map04914
		Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006457	biological_process	protein folding
GO:0005524	molecular_function	ATP binding
GO:0051082	molecular_function	unfolded protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	53.109
	SRR3591706	second leaf	8.001
	SRR3591707	mature leaf	64.730
	SRR3591708	Shoot apex	31.002
	SRR3591709	Stem	57.569
	SRR3591710	White floral bud	12.463
	SRR3591711	White flower	19.731
	SRR3591712	Green floral bud	15.711
	SRR3591713	Yellow flower	4.973
SRP173429	SRR8316895	Juvenile bud stage	457.769
	SRR8316896	Juvenile bud stage	778.707
	SRR8316897	Juvenile bud stage	286.271
	SRR8316894	Third green stage	43.807
	SRR8316900	Third green stage	105.462
	SRR8316901	Third green stage	205.551
	SRR8316898	Complete white stage	8.876
	SRR8316899	Complete white stage	57.296
	SRR8316903	Complete white stage	31.778
	SRR8316902	Silver flowering stage	66.037
	SRR8316904	Silver flowering stage	71.437
	SRR8316905	Silver flowering stage	56.099
	SRR8316906	Gold flowering stage	203.281
	SRR8316907	Gold flowering stage	182.475
	SRR8316908	Gold flowering stage	100.665
SRP132670	SRR6706286	Control	74.884
	SRR6706287	Light intensity 50%	54.434
	SRR6706288	Light intensity 20%	40.286
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	74.207
	CNS0095593	Slightly white alabastrum(diploid) 2	66.684
	CNS0095594	Slightly white alabastrum(diploid) 3	102.423
	CNS0095595	Whole white alabastrum(diploid) 2	57.423
	CNS0095596	Whole white alabastrum(diploid) 3	35.936
	CNS0095597	Whole white alabastrum(diploid) 4	52.265
	CNS0095598	Silvery flower (diploied) 1	111.374
	CNS0095599	Silvery flower (diploied) 2	696.012
	CNS0095600	Silvery flower (diploied) 3	559.241
	CNS0095601	Golden flower (diploid) 1	972.333
	CNS0095602	Golden flower (diploid) 2	689.697
	CNS0095603	Golden flower (diploid) 3	679.532
	CNS0095604	Slightly white alabastrum(tetraploid) 1	59.409
	CNS0095605	Slightly white alabastrum(tetraploid) 2	56.618
	CNS0095606	Slightly white alabastrum(tetraploid) 3	99.301
	CNS0095607	Whole white alabastrum(tetraploid) 1	35.918
	CNS0095608	Whole white alabastrum(tetraploid) 2	21.166
	CNS0095609	Whole white alabastrum(tetraploid) 3	57.084
	CNS0095610	Silvery flower (tetraploid) 1	53.637
	CNS0095611	Silvery flower (tetraploid) 2	99.517
	CNS0095612	Silvery flower (tetraploid) 3	36.335
	CNS0095613	Golden flower (tetraploid) 1	76.434
	CNS0095614	Golden flower (tetraploid) 2	80.014
	CNS0095615	Golden flower (tetraploid) 3	12.788
CRA001975	CRR073297	Stem 1	22.289
	CRR073298	Stem 2	9.485
	CRR073299	Stem 3	13.718
	CRR073300	Leaf 1	10.160
	CRR073301	Leaf 2	9.779
	CRR073302	Leaf 3	5.034
	CRR073303	Juvenile bud 1	10.586
	CRR073304	Juvenile bud 2	4.300
	CRR073305	Juvenile bud 3	21.787
	CRR073306	Third green 1	29.721
	CRR073307	Third green 2	13.382
	CRR073308	Third green 3	13.971
	CRR073309	Second white 1	13.505
	CRR073310	Second white 2	24.727
	CRR073311	Second white 3	20.945
	CRR073312	Silver flowering 1	8.403
	CRR073313	Silver flowering 2	7.100
	CRR073314	Silver flowering 3	4.631
	CRR073315	Gold flowering 1	9.959
	CRR073316	Gold flowering 2	11.831
	CRR073317	Gold flowering 3	8.086
	CRR073318	Tawny withering 1	12.951
	CRR073319	Tawny withering 2	17.131
	CRR073320	Tawny withering 3	18.327