Gene detail

Detail information of GWHGAAZE026324

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009608643.1	1.0013E-160	PREDICTED: probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 [Nicotiana tomentosiformis]
COG	YP_004303682.1	8E-28	cytochrome P450
Swissprot	tr\|O64900\|C80B2_ESCCA	6E-107	(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2
trEMBL	tr\|M1CDB6\|M1CDB6_SOLTU	3E-152	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400065046}
TAIR10	AT2G45550.1	1E-61	cytochrome P450, family 76, subfamily C, polypeptide 4

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	2744610	2748359	+
GWHAAZE00000008	mRNA	2744610	2748359	+
GWHAAZE00000008	exon	2744610	2744911	+
GWHAAZE00000008	exon	2746754	2747162	+
GWHAAZE00000008	exon	2747751	2748359	+
GWHAAZE00000008	CDS	2744610	2744911	+
GWHAAZE00000008	CDS	2746754	2747162	+
GWHAAZE00000008	CDS	2747751	2748359	+

Transcript Sequence
>GWHTAAZE026358 ATGATTAATTTGTTATTCGTTCTCGTTGTACCGTCCTTAATATTCTTTCTTTTCATTTTTAAGCAATTCATCAATTCATCAAAATTTGGAGCAGCACCACTTCCACCAGGGCCATTTCCATGGCCAATAGTGGGAAACTTATTTCAAATGGGAAAGTATCACCATGTCACACTGGCCAACCTAGCCAAAGTCCATGGACCACTCATGTTGGTTCGTTTAGGTTCGACACCGGTTGTTGTGGGCTCATCCCCAGCGGCCGCCGCTGAGATTCTCAAGACCCATGATCGCTTACTTTCCGGCAGATACGTGCCAAATGGTATTGCGGTTGAGGGCTCAAAGTTTCACAGCTTAAACCTAGGGTTTATGGAAGAATGCGACGACCGTTGGAAAAACATAAGAGGAGTCTACAAGTCCGAGCTATTCTCCGTGAAAGCAATTGAATCACAAGTGAGTTTAAGGGAGGAGAAAGTGGGAGAAATGGTGAATTTCTTGTGCTCAAAACAAGGCCAAGTGTTGAAGATCAAAGAAGTAGTACATAGTACTGCTTTGAATATATTGAGCAATATTTGTCTCACAACTGATCTTGTAGATTTTGAGGGTAAGGGTTTGGGGGAAGGGTTGAGTGGGTACATAAGGGGATTTGCTGCTTTGGGTGGGACTGCTGTTTTACATGATTTTTCCCCGATGTCTAGTGGCTGGGCTGCTAAAACGGAGCTATTTAGTGCTGGTACAGAGTCTACAAGTGCAACATCCGAGTGGGCACTTGTTGAACTTATTAAAAGTCCAGAAGCCATGAAGAAACTTCGTAACGAACTTGCAAAAGTTGTCGGTGGAGACCGCGTAAGGGAGGCTCATTTACCACGATTACCCTACTTAGAAGCTTGTGTTAAGGAAACCTTAAGGCTGCACCCTCCCGGACCATTGCTTCTACCTCATCAAGCTGTGGAGACATCCGAAGTAATGGGTTATACGATTCCCAAGGGCACTCTAGTGATGGTGAACATGTGGGCAATTGCAAGAGACCCAAAGATCTGGACCGATGCCTCAAGTTTCAAACCAGAGCGATTTCTTGAATTGGGTGCAGATTACAAGGGGCATGATTTCATGTATATACCTTTTAGTTCTGGGAGGAGATTCTGTCCAGGACAACCATTGGCGTCTAAAGCAGTTCCTTTGATTGTTGCGTCATTAATTCACACATTTGATTGGGTTCTTCCAAACAATATGGATCCCGCGGATATAGACATGAATGATTTGGTCGATATCACAATGTTGAAGGAAAATCCGTTATGCATTAGTCCTATATTACGATCGATGTGA

Network for GWHGAAZE026324

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	35	193	3.20E-18
PF00067.23	p450	237	424	2.10E-64

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.753
	SRR3591711	White flower	0.267
	SRR3591712	Green floral bud	2.523
	SRR3591713	Yellow flower	0.373
SRP173429	SRR8316895	Juvenile bud stage	12.474
	SRR8316896	Juvenile bud stage	6.989
	SRR8316897	Juvenile bud stage	2.321
	SRR8316894	Third green stage	2.454
	SRR8316900	Third green stage	17.768
	SRR8316901	Third green stage	15.503
	SRR8316898	Complete white stage	0.408
	SRR8316899	Complete white stage	9.684
	SRR8316903	Complete white stage	0.483
	SRR8316902	Silver flowering stage	0.124
	SRR8316904	Silver flowering stage	0.263
	SRR8316905	Silver flowering stage	0.071
	SRR8316906	Gold flowering stage	0.212
	SRR8316907	Gold flowering stage	0.821
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	9.137
	SRR6706287	Light intensity 50%	8.099
	SRR6706288	Light intensity 20%	7.046
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.135
	CNS0095593	Slightly white alabastrum(diploid) 2	16.340
	CNS0095594	Slightly white alabastrum(diploid) 3	9.691
	CNS0095595	Whole white alabastrum(diploid) 2	9.317
	CNS0095596	Whole white alabastrum(diploid) 3	8.445
	CNS0095597	Whole white alabastrum(diploid) 4	4.410
	CNS0095598	Silvery flower (diploied) 1	0.122
	CNS0095599	Silvery flower (diploied) 2	0.224
	CNS0095600	Silvery flower (diploied) 3	0.725
	CNS0095601	Golden flower (diploid) 1	0.243
	CNS0095602	Golden flower (diploid) 2	0.216
	CNS0095603	Golden flower (diploid) 3	0.332
	CNS0095604	Slightly white alabastrum(tetraploid) 1	5.865
	CNS0095605	Slightly white alabastrum(tetraploid) 2	5.703
	CNS0095606	Slightly white alabastrum(tetraploid) 3	14.103
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.560
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.502
	CNS0095609	Whole white alabastrum(tetraploid) 3	4.787
	CNS0095610	Silvery flower (tetraploid) 1	0.181
	CNS0095611	Silvery flower (tetraploid) 2	0.059
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.029
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.001
CRA001975	CRR073297	Stem 1	18.949
	CRR073298	Stem 2	11.994
	CRR073299	Stem 3	24.921
	CRR073300	Leaf 1	9.415
	CRR073301	Leaf 2	11.256
	CRR073302	Leaf 3	7.960
	CRR073303	Juvenile bud 1	5.867
	CRR073304	Juvenile bud 2	2.093
	CRR073305	Juvenile bud 3	8.457
	CRR073306	Third green 1	1.488
	CRR073307	Third green 2	1.957
	CRR073308	Third green 3	0.688
	CRR073309	Second white 1	1.218
	CRR073310	Second white 2	0.272
	CRR073311	Second white 3	1.262
	CRR073312	Silver flowering 1	1.037
	CRR073313	Silver flowering 2	0.368
	CRR073314	Silver flowering 3	1.185
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.002
	CRR073318	Tawny withering 1	13.704
	CRR073319	Tawny withering 2	4.151
	CRR073320	Tawny withering 3	24.972