Detail information of GWHGAAZE026341


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007218032.10hypothetical protein PRUPE_ppa006002mg [Prunus persica]
COGYP_007055144.19E-18WD40 repeat-containing protein
Swissprottr|Q9FNZ1|C3H63_ARATH0Zinc finger CCCH domain-containing protein 63
trEMBLtr|M5X176|M5X176_PRUPE0Uncharacterized protein {ECO:0000313|EMBL:EMJ19231.1}
TAIR10AT5G51980.14E-163Transducin/WD40 repeat-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene30462743055362+
GWHAAZE00000008mRNA30462743055362+
GWHAAZE00000008exon30462743046717+
GWHAAZE00000008exon30477153047810+
GWHAAZE00000008exon30494293049518+
GWHAAZE00000008exon30496453049746+
GWHAAZE00000008exon30503643050510+
GWHAAZE00000008exon30506303050663+
GWHAAZE00000008exon30509713051104+
GWHAAZE00000008exon30512033051262+
GWHAAZE00000008exon30547533054850+
GWHAAZE00000008exon30552093055362+
GWHAAZE00000008CDS30462743046717+
GWHAAZE00000008CDS30477153047810+
GWHAAZE00000008CDS30494293049518+
GWHAAZE00000008CDS30496453049746+
GWHAAZE00000008CDS30503643050510+
GWHAAZE00000008CDS30506303050663+
GWHAAZE00000008CDS30509713051104+
GWHAAZE00000008CDS30512033051262+
GWHAAZE00000008CDS30547533054850+
GWHAAZE00000008CDS30552093055362+
Transcript Sequence

Network for GWHGAAZE026341

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00400.33WD401391750.00041
PF00400.33WD403173510.011
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC3H
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding
GO:0046872molecular_functionmetal ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf30.264
SRR3591706second leaf18.003
SRR3591707mature leaf20.019
SRR3591708Shoot apex26.824
SRR3591709Stem30.709
SRR3591710White floral bud31.443
SRR3591711White flower38.696
SRR3591712Green floral bud33.241
SRR3591713Yellow flower43.839
SRP173429 SRR8316895Juvenile bud stage 18.167
SRR8316896Juvenile bud stage 22.713
SRR8316897Juvenile bud stage 11.723
SRR8316894Third green stage 9.184
SRR8316900Third green stage 30.649
SRR8316901Third green stage 28.808
SRR8316898Complete white stage 13.607
SRR8316899Complete white stage 38.159
SRR8316903Complete white stage 19.257
SRR8316902Silver flowering stage14.500
SRR8316904Silver flowering stage19.304
SRR8316905Silver flowering stage9.061
SRR8316906Gold flowering stage 42.019
SRR8316907Gold flowering stage 36.766
SRR8316908Gold flowering stage 37.630
SRP132670SRR6706286Control29.798
SRR6706287Light intensity 50%31.488
SRR6706288Light intensity 20%34.659
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.570
CNS0095593Slightly white alabastrum(diploid) 215.471
CNS0095594Slightly white alabastrum(diploid) 315.463
CNS0095595Whole white alabastrum(diploid) 216.978
CNS0095596Whole white alabastrum(diploid) 314.079
CNS0095597Whole white alabastrum(diploid) 414.696
CNS0095598Silvery flower (diploied) 123.135
CNS0095599Silvery flower (diploied) 219.476
CNS0095600Silvery flower (diploied) 332.273
CNS0095601Golden flower (diploid) 120.883
CNS0095602Golden flower (diploid) 230.690
CNS0095603Golden flower (diploid) 329.513
CNS0095604Slightly white alabastrum(tetraploid) 123.226
CNS0095605Slightly white alabastrum(tetraploid) 216.781
CNS0095606Slightly white alabastrum(tetraploid) 342.163
CNS0095607Whole white alabastrum(tetraploid) 111.948
CNS0095608Whole white alabastrum(tetraploid) 210.688
CNS0095609Whole white alabastrum(tetraploid) 329.733
CNS0095610Silvery flower (tetraploid) 142.670
CNS0095611Silvery flower (tetraploid) 233.796
CNS0095612Silvery flower (tetraploid) 328.125
CNS0095613Golden flower (tetraploid) 128.769
CNS0095614Golden flower (tetraploid) 239.842
CNS0095615Golden flower (tetraploid) 334.614
CRA001975CRR073297Stem 119.971
CRR073298Stem 218.758
CRR073299Stem 320.979
CRR073300Leaf 123.266
CRR073301Leaf 221.472
CRR073302Leaf 321.810
CRR073303Juvenile bud 121.253
CRR073304Juvenile bud 221.802
CRR073305Juvenile bud 323.797
CRR073306Third green 112.113
CRR073307Third green 29.216
CRR073308Third green 311.404
CRR073309Second white 120.288
CRR073310Second white 222.533
CRR073311Second white 319.851
CRR073312Silver flowering 120.223
CRR073313Silver flowering 223.235
CRR073314Silver flowering 321.364
CRR073315Gold flowering 113.719
CRR073316Gold flowering 215.456
CRR073317Gold flowering 310.927
CRR073318Tawny withering 118.622
CRR073319Tawny withering 218.892
CRR073320Tawny withering 318.413