Detail information of GWHGAAZE026344


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_003636744.10L-idonate 5-dehydrogenase [Medicago truncatula]
COGYP_001103186.17E-91zinc-binding dehydrogenase
Swissprottr|Q9FJ95|DHSO_ARATH0Sorbitol dehydrogenase
trEMBLtr|G7ZXE4|G7ZXE4_MEDTR0Sorbitol dehydrogenase-like protein {ECO:0000313|EMBL:KEH26573.1}
TAIR10AT5G51970.22E-164GroES-like zinc-binding alcohol dehydrogenase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene30753603077970-
GWHAAZE00000008mRNA30753603077970-
GWHAAZE00000008exon30753603075552-
GWHAAZE00000008exon30757623075949-
GWHAAZE00000008exon30762443076516-
GWHAAZE00000008exon30768923077128-
GWHAAZE00000008exon30776213077688-
GWHAAZE00000008exon30779043077970-
GWHAAZE00000008CDS30779043077970-
GWHAAZE00000008CDS30776213077688-
GWHAAZE00000008CDS30768923077128-
GWHAAZE00000008CDS30762443076516-
GWHAAZE00000008CDS30757623075949-
GWHAAZE00000008CDS30753603075552-
Transcript Sequence

Network for GWHGAAZE026344

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.13ADH_N241353.00E-30
PF00107.27ADH_zinc_N1753004.60E-28
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00008SORD, gutB Metabolic pathways map01100
Pentose and glucuronate interconversionsmap00040
Fructose and mannose metabolismmap00051

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.385
SRR3591706second leaf2.073
SRR3591707mature leaf18.274
SRR3591708Shoot apex4.517
SRR3591709Stem15.377
SRR3591710White floral bud153.915
SRR3591711White flower112.666
SRR3591712Green floral bud77.762
SRR3591713Yellow flower143.574
SRP173429 SRR8316895Juvenile bud stage 7.006
SRR8316896Juvenile bud stage 13.712
SRR8316897Juvenile bud stage 3.900
SRR8316894Third green stage 4.696
SRR8316900Third green stage 14.948
SRR8316901Third green stage 11.888
SRR8316898Complete white stage 23.516
SRR8316899Complete white stage 48.724
SRR8316903Complete white stage 45.250
SRR8316902Silver flowering stage25.428
SRR8316904Silver flowering stage38.011
SRR8316905Silver flowering stage19.647
SRR8316906Gold flowering stage 50.789
SRR8316907Gold flowering stage 59.649
SRR8316908Gold flowering stage 74.678
SRP132670SRR6706286Control11.683
SRR6706287Light intensity 50%9.469
SRR6706288Light intensity 20%12.123
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.366
CNS0095593Slightly white alabastrum(diploid) 211.804
CNS0095594Slightly white alabastrum(diploid) 310.898
CNS0095595Whole white alabastrum(diploid) 210.970
CNS0095596Whole white alabastrum(diploid) 38.719
CNS0095597Whole white alabastrum(diploid) 423.144
CNS0095598Silvery flower (diploied) 177.697
CNS0095599Silvery flower (diploied) 241.108
CNS0095600Silvery flower (diploied) 369.553
CNS0095601Golden flower (diploid) 163.659
CNS0095602Golden flower (diploid) 2102.907
CNS0095603Golden flower (diploid) 399.644
CNS0095604Slightly white alabastrum(tetraploid) 15.130
CNS0095605Slightly white alabastrum(tetraploid) 26.996
CNS0095606Slightly white alabastrum(tetraploid) 35.541
CNS0095607Whole white alabastrum(tetraploid) 14.880
CNS0095608Whole white alabastrum(tetraploid) 25.815
CNS0095609Whole white alabastrum(tetraploid) 35.140
CNS0095610Silvery flower (tetraploid) 175.181
CNS0095611Silvery flower (tetraploid) 2142.994
CNS0095612Silvery flower (tetraploid) 3624.981
CNS0095613Golden flower (tetraploid) 1246.540
CNS0095614Golden flower (tetraploid) 2167.652
CNS0095615Golden flower (tetraploid) 3443.664
CRA001975CRR073297Stem 152.398
CRR073298Stem 249.691
CRR073299Stem 358.624
CRR073300Leaf 137.921
CRR073301Leaf 251.331
CRR073302Leaf 351.863
CRR073303Juvenile bud 144.419
CRR073304Juvenile bud 233.423
CRR073305Juvenile bud 352.884
CRR073306Third green 173.138
CRR073307Third green 256.692
CRR073308Third green 363.933
CRR073309Second white 1267.750
CRR073310Second white 2239.735
CRR073311Second white 3205.773
CRR073312Silver flowering 1214.733
CRR073313Silver flowering 2220.879
CRR073314Silver flowering 3179.021
CRR073315Gold flowering 1190.176
CRR073316Gold flowering 2204.389
CRR073317Gold flowering 3244.540
CRR073318Tawny withering 1107.710
CRR073319Tawny withering 285.902
CRR073320Tawny withering 395.954