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Detail information of GWHGAAZE026354
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
BAA37127.1
6.8201E-165
gibberelin 20-oxidase [Lactuca sativa]
COG
YP_006419186.1
8E-23
dioxygenase, isopenicillin N synthase
Swissprot
tr|Q39110|GAOX1_ARATH
5E-136
Gibberellin 20 oxidase 1
trEMBL
tr|Q9ZWQ2|Q9ZWQ2_LACSA
3E-165
Gibberelin 20-oxidase {ECO:0000313|EMBL:BAA37127.1}
TAIR10
AT4G25420.1
8E-111
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000008
gene
3273453
3275268
+
GWHAAZE00000008
mRNA
3273453
3275268
+
GWHAAZE00000008
exon
3273453
3274018
+
GWHAAZE00000008
exon
3274396
3274642
+
GWHAAZE00000008
exon
3274984
3275268
+
GWHAAZE00000008
CDS
3273453
3274018
+
GWHAAZE00000008
CDS
3274396
3274642
+
GWHAAZE00000008
CDS
3274984
3275268
+
Transcript Sequence
>GWHTAAZE026388 ATGGCAATCGATTGTATGGCGAAGATGGTGCCTCCTATGCTACAACAACCGAAAGAAGAACACCGGGATCCGGAGGGAGAAAAAAAATTGGTTTTTGATAATGCTGTTATTCGGTACGAAACCAACATACCGAAACAGTACGAGTGGCCTGATCATGAGAAGCCCTCGACAGTCAGGCCACCGCCACTGGACGTCCCAACCATCGATCTGGCAGGGTTTCTCTCTGGTGAGCCTAGGGCAGCTGCAGAGGCGTGCAAGCTCATCGGAGAGGCGTGCCGTAAGCACGGATTCTTTGTAGTGGTCAACCATGGAGTTGACTTGAAGTTGATCAATGATGCTCACAAGTACATGGACTTGTTCTTTGGGCTGCCTCTAAGTGAGAGGCAAAAGGTTCAAAGGAAGCTTGGTGAACATTGTGGATATGCTAGTAGCTTCATTGGGAGATTCTCCTCTAGTCTTCCTTGGAAAGAAACTCTCTCTTTTGAGTTCAAGGATGACCAGAAAGAATCCAGGCCTATTGAGGAGTATATTAAGAGCAAAATGGGTGAAGATTTCACTCAACTCGGGCGAGTTTATCAAGAGTACAGCAACGCCATGAGCAAGCTTTGCCTCGAGATCTCGGAGCTACTAGCGATCAGCTTGGGTGTGAAGGACCGGTTTCATTTTAGGAAGTTTTACGAAGGAAACAATTCGATAATGCGACTCAACTACTACCCGCCGTGCCAGAAACCTGACATAGCCCTAGGGACGGGTCCACATTGCGATCCAACGTCCTTGACTATACTTCACCAAGACATGGTTGGCGGCCTGGAGGCATTTACAAATGGAATATACAAAAGCTGCTTGCATAGAGTGGTGGTGAACAACAAAGAAGCTAGGAAATCACTTGCTTTCTTTTGCAGCCCAAGGGTGGATAAGGTGTTGACCCCACCAACTGAGTTGATTGACGAAAATAACCCTAGGCTCTACCCAGACTTCACTTGGGGCATGATGCTTAAATTCACCATGAAGCATTACAGAGCTGACGTCACTACCCTCCAACAATTCACCAAATGGCTTGAGGATCAAAAATTTGCAGCAGCTCATGAGGAGAACTAA
Network for GWHGAAZE026354
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF14226.7
DIOX_N
65
168
5.30E-23
PF03171.21
2OG-FeII_Oxy
230
272
5.60E-09
Protein Sequence
>GWHPAAZE026372 MAIDCMAKMVPPMLQQPKEEHRDPEGEKKLVFDNAVIRYETNIPKQYEWPDHEKPSTVRPPPLDVPTIDLAGFLSGEPRAAAEACKLIGEACRKHGFFVVVNHGVDLKLINDAHKYMDLFFGLPLSERQKVQRKLGEHCGYASSFIGRFSSSLPWKETLSFEFKDDQKESRPIEEYIKSKMGEDFTQLGRVYQEYSNAMSKLCLEISELLAISLGVKDRFHFRKFYEGNNSIMRLNYYPPCQKPDIALGTGPHCDPTSLTILHQDMVGGLEAFTNGIYKSCLHRVVVNNKEARKSLAFFCSPRVDKVLTPPTELIDENNPRLYPDFTWGMMLKFTMKHYRADVTTLQQFTKWLEDQKFAAAHEEN
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K05282
E1.14.11.12
Metabolic pathways
map01100
Biosynthesis of secondary metabolites
map01110
Diterpenoid biosynthesis
map00904
Gene Ontology
GO term
Ontology
Name
GO:0055114
biological_process
oxidation-reduction process
GO:0016491
molecular_function
oxidoreductase activity
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
0.584
SRR3591706
second leaf
0.050
SRR3591707
mature leaf
0.292
SRR3591708
Shoot apex
0.000
SRR3591709
Stem
1.243
SRR3591710
White floral bud
0.148
SRR3591711
White flower
0.075
SRR3591712
Green floral bud
0.049
SRR3591713
Yellow flower
0.000
SRP173429
SRR8316895
Juvenile bud stage
0.000
SRR8316896
Juvenile bud stage
0.030
SRR8316897
Juvenile bud stage
0.000
SRR8316894
Third green stage
0.000
SRR8316900
Third green stage
0.000
SRR8316901
Third green stage
0.000
SRR8316898
Complete white stage
0.000
SRR8316899
Complete white stage
0.000
SRR8316903
Complete white stage
0.184
SRR8316902
Silver flowering stage
0.096
SRR8316904
Silver flowering stage
0.031
SRR8316905
Silver flowering stage
0.000
SRR8316906
Gold flowering stage
0.000
SRR8316907
Gold flowering stage
0.000
SRR8316908
Gold flowering stage
0.037
SRP132670
SRR6706286
Control
0.000
SRR6706287
Light intensity 50%
0.000
SRR6706288
Light intensity 20%
0.169
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
0.040
CNS0095593
Slightly white alabastrum(diploid) 2
0.000
CNS0095594
Slightly white alabastrum(diploid) 3
0.000
CNS0095595
Whole white alabastrum(diploid) 2
0.000
CNS0095596
Whole white alabastrum(diploid) 3
0.000
CNS0095597
Whole white alabastrum(diploid) 4
0.000
CNS0095598
Silvery flower (diploied) 1
0.000
CNS0095599
Silvery flower (diploied) 2
0.069
CNS0095600
Silvery flower (diploied) 3
0.264
CNS0095601
Golden flower (diploid) 1
0.000
CNS0095602
Golden flower (diploid) 2
0.000
CNS0095603
Golden flower (diploid) 3
0.124
CNS0095604
Slightly white alabastrum(tetraploid) 1
0.000
CNS0095605
Slightly white alabastrum(tetraploid) 2
0.072
CNS0095606
Slightly white alabastrum(tetraploid) 3
0.023
CNS0095607
Whole white alabastrum(tetraploid) 1
0.000
CNS0095608
Whole white alabastrum(tetraploid) 2
0.000
CNS0095609
Whole white alabastrum(tetraploid) 3
0.000
CNS0095610
Silvery flower (tetraploid) 1
0.122
CNS0095611
Silvery flower (tetraploid) 2
0.113
CNS0095612
Silvery flower (tetraploid) 3
0.000
CNS0095613
Golden flower (tetraploid) 1
0.000
CNS0095614
Golden flower (tetraploid) 2
0.000
CNS0095615
Golden flower (tetraploid) 3
0.000
CRA001975
CRR073297
Stem 1
0.000
CRR073298
Stem 2
0.000
CRR073299
Stem 3
0.085
CRR073300
Leaf 1
0.000
CRR073301
Leaf 2
0.000
CRR073302
Leaf 3
0.176
CRR073303
Juvenile bud 1
0.000
CRR073304
Juvenile bud 2
0.168
CRR073305
Juvenile bud 3
0.000
CRR073306
Third green 1
0.000
CRR073307
Third green 2
0.000
CRR073308
Third green 3
0.000
CRR073309
Second white 1
0.000
CRR073310
Second white 2
0.000
CRR073311
Second white 3
0.000
CRR073312
Silver flowering 1
0.000
CRR073313
Silver flowering 2
0.000
CRR073314
Silver flowering 3
0.063
CRR073315
Gold flowering 1
0.000
CRR073316
Gold flowering 2
0.000
CRR073317
Gold flowering 3
0.000
CRR073318
Tawny withering 1
0.000
CRR073319
Tawny withering 2
0.000
CRR073320
Tawny withering 3
0.000