Detail information of GWHGAAZE026359


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006490233.13.80098E-87PREDICTED: F-box protein At5g07610-like [Citrus sinensis]
Swissprottr|Q9FLS0|FB253_ARATH2E-50F-box protein At5g07610
trEMBLtr|A0A067EF88|A0A067EF88_CITSI2E-85Uncharacterized protein {ECO:0000313|EMBL:KDO52565.1}
TAIR10AT5G07610.11E-44F-box family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene33359923337188-
GWHAAZE00000008mRNA33359923337188-
GWHAAZE00000008exon33359923337188-
GWHAAZE00000008CDS33359923337188-
Transcript Sequence

Network for GWHGAAZE026359

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box23579.30E-07
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.953
SRR3591706second leaf0.662
SRR3591707mature leaf2.306
SRR3591708Shoot apex1.735
SRR3591709Stem0.851
SRR3591710White floral bud2.539
SRR3591711White flower1.671
SRR3591712Green floral bud2.464
SRR3591713Yellow flower3.317
SRP173429 SRR8316895Juvenile bud stage 0.991
SRR8316896Juvenile bud stage 1.989
SRR8316897Juvenile bud stage 0.424
SRR8316894Third green stage 0.979
SRR8316900Third green stage 3.137
SRR8316901Third green stage 1.901
SRR8316898Complete white stage 1.333
SRR8316899Complete white stage 2.486
SRR8316903Complete white stage 1.258
SRR8316902Silver flowering stage0.733
SRR8316904Silver flowering stage0.819
SRR8316905Silver flowering stage0.804
SRR8316906Gold flowering stage 2.383
SRR8316907Gold flowering stage 1.320
SRR8316908Gold flowering stage 4.167
SRP132670SRR6706286Control2.457
SRR6706287Light intensity 50%2.107
SRR6706288Light intensity 20%1.518
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.539
CNS0095593Slightly white alabastrum(diploid) 21.961
CNS0095594Slightly white alabastrum(diploid) 30.967
CNS0095595Whole white alabastrum(diploid) 21.360
CNS0095596Whole white alabastrum(diploid) 32.195
CNS0095597Whole white alabastrum(diploid) 41.844
CNS0095598Silvery flower (diploied) 10.747
CNS0095599Silvery flower (diploied) 20.370
CNS0095600Silvery flower (diploied) 31.788
CNS0095601Golden flower (diploid) 11.288
CNS0095602Golden flower (diploid) 21.759
CNS0095603Golden flower (diploid) 31.456
CNS0095604Slightly white alabastrum(tetraploid) 13.974
CNS0095605Slightly white alabastrum(tetraploid) 22.628
CNS0095606Slightly white alabastrum(tetraploid) 33.869
CNS0095607Whole white alabastrum(tetraploid) 13.475
CNS0095608Whole white alabastrum(tetraploid) 22.351
CNS0095609Whole white alabastrum(tetraploid) 32.689
CNS0095610Silvery flower (tetraploid) 12.633
CNS0095611Silvery flower (tetraploid) 23.953
CNS0095612Silvery flower (tetraploid) 33.793
CNS0095613Golden flower (tetraploid) 12.539
CNS0095614Golden flower (tetraploid) 23.258
CNS0095615Golden flower (tetraploid) 33.556
CRA001975CRR073297Stem 11.508
CRR073298Stem 20.877
CRR073299Stem 31.581
CRR073300Leaf 11.206
CRR073301Leaf 21.504
CRR073302Leaf 30.673
CRR073303Juvenile bud 11.375
CRR073304Juvenile bud 21.012
CRR073305Juvenile bud 31.432
CRR073306Third green 10.550
CRR073307Third green 20.524
CRR073308Third green 30.416
CRR073309Second white 10.506
CRR073310Second white 20.518
CRR073311Second white 30.939
CRR073312Silver flowering 10.640
CRR073313Silver flowering 20.461
CRR073314Silver flowering 30.296
CRR073315Gold flowering 10.213
CRR073316Gold flowering 20.687
CRR073317Gold flowering 30.106
CRR073318Tawny withering 11.204
CRR073319Tawny withering 20.801
CRR073320Tawny withering 31.026