Detail information of GWHGAAZE026363


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006490233.12.60628E-97PREDICTED: F-box protein At5g07610-like [Citrus sinensis]
Swissprottr|Q9FLS0|FB253_ARATH1E-54F-box protein At5g07610
trEMBLtr|A0A067EF88|A0A067EF88_CITSI4E-96Uncharacterized protein {ECO:0000313|EMBL:KDO52565.1}
TAIR10AT5G07610.14E-48F-box family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene33549253356109-
GWHAAZE00000008mRNA33549253356109-
GWHAAZE00000008exon33549253356109-
GWHAAZE00000008CDS33549253356109-
Transcript Sequence

Network for GWHGAAZE026363

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box16504.70E-07
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.046
SRR3591706second leaf2.894
SRR3591707mature leaf3.607
SRR3591708Shoot apex3.725
SRR3591709Stem3.490
SRR3591710White floral bud5.590
SRR3591711White flower3.707
SRR3591712Green floral bud5.219
SRR3591713Yellow flower4.741
SRP173429 SRR8316895Juvenile bud stage 1.218
SRR8316896Juvenile bud stage 3.061
SRR8316897Juvenile bud stage 1.527
SRR8316894Third green stage 1.469
SRR8316900Third green stage 3.636
SRR8316901Third green stage 3.309
SRR8316898Complete white stage 2.597
SRR8316899Complete white stage 3.493
SRR8316903Complete white stage 4.575
SRR8316902Silver flowering stage1.899
SRR8316904Silver flowering stage4.247
SRR8316905Silver flowering stage1.638
SRR8316906Gold flowering stage 4.943
SRR8316907Gold flowering stage 6.272
SRR8316908Gold flowering stage 5.272
SRP132670SRR6706286Control3.553
SRR6706287Light intensity 50%3.926
SRR6706288Light intensity 20%3.231
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.625
CNS0095593Slightly white alabastrum(diploid) 21.541
CNS0095594Slightly white alabastrum(diploid) 31.488
CNS0095595Whole white alabastrum(diploid) 22.198
CNS0095596Whole white alabastrum(diploid) 31.639
CNS0095597Whole white alabastrum(diploid) 43.803
CNS0095598Silvery flower (diploied) 12.588
CNS0095599Silvery flower (diploied) 20.932
CNS0095600Silvery flower (diploied) 35.917
CNS0095601Golden flower (diploid) 11.709
CNS0095602Golden flower (diploid) 24.765
CNS0095603Golden flower (diploid) 33.951
CNS0095604Slightly white alabastrum(tetraploid) 14.292
CNS0095605Slightly white alabastrum(tetraploid) 23.360
CNS0095606Slightly white alabastrum(tetraploid) 35.841
CNS0095607Whole white alabastrum(tetraploid) 14.573
CNS0095608Whole white alabastrum(tetraploid) 23.298
CNS0095609Whole white alabastrum(tetraploid) 35.227
CNS0095610Silvery flower (tetraploid) 16.476
CNS0095611Silvery flower (tetraploid) 28.171
CNS0095612Silvery flower (tetraploid) 39.943
CNS0095613Golden flower (tetraploid) 13.354
CNS0095614Golden flower (tetraploid) 25.073
CNS0095615Golden flower (tetraploid) 36.901
CRA001975CRR073297Stem 12.391
CRR073298Stem 22.558
CRR073299Stem 30.924
CRR073300Leaf 13.395
CRR073301Leaf 22.018
CRR073302Leaf 31.768
CRR073303Juvenile bud 11.016
CRR073304Juvenile bud 21.903
CRR073305Juvenile bud 31.363
CRR073306Third green 12.248
CRR073307Third green 21.608
CRR073308Third green 32.611
CRR073309Second white 11.862
CRR073310Second white 22.840
CRR073311Second white 32.886
CRR073312Silver flowering 11.619
CRR073313Silver flowering 22.105
CRR073314Silver flowering 31.455
CRR073315Gold flowering 11.149
CRR073316Gold flowering 20.362
CRR073317Gold flowering 30.627
CRR073318Tawny withering 11.815
CRR073319Tawny withering 20.906
CRR073320Tawny withering 32.109