Detail information of GWHGAAZE026484


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009590646.10PREDICTED: transmembrane protein 87B [Nicotiana tomentosiformis]
trEMBLtr|D7T4B6|D7T4B6_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI25348.3}
TAIR10AT1G61670.10Lung seven transmembrane receptor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene53651495371901+
GWHAAZE00000008mRNA53651495371901+
GWHAAZE00000008exon53651495365375+
GWHAAZE00000008exon53662185367151+
GWHAAZE00000008exon53672995367394+
GWHAAZE00000008exon53706905370880+
GWHAAZE00000008exon53717185371901+
GWHAAZE00000008CDS53651495365375+
GWHAAZE00000008CDS53662185367151+
GWHAAZE00000008CDS53672995367394+
GWHAAZE00000008CDS53706905370880+
GWHAAZE00000008CDS53717185371901+
Transcript Sequence

Network for GWHGAAZE026484

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0197


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06814.14Lung_7-TM_R1774639.20E-108
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0016021cellular_componentintegral component of membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf41.565
SRR3591706second leaf15.590
SRR3591707mature leaf18.966
SRR3591708Shoot apex20.506
SRR3591709Stem36.708
SRR3591710White floral bud31.745
SRR3591711White flower35.752
SRR3591712Green floral bud27.405
SRR3591713Yellow flower28.936
SRP173429 SRR8316895Juvenile bud stage 12.988
SRR8316896Juvenile bud stage 14.447
SRR8316897Juvenile bud stage 10.938
SRR8316894Third green stage 7.620
SRR8316900Third green stage 19.001
SRR8316901Third green stage 20.010
SRR8316898Complete white stage 11.539
SRR8316899Complete white stage 29.574
SRR8316903Complete white stage 21.577
SRR8316902Silver flowering stage13.553
SRR8316904Silver flowering stage19.307
SRR8316905Silver flowering stage8.943
SRR8316906Gold flowering stage 23.654
SRR8316907Gold flowering stage 23.132
SRR8316908Gold flowering stage 28.516
SRP132670SRR6706286Control17.214
SRR6706287Light intensity 50%16.535
SRR6706288Light intensity 20%18.262
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.024
CNS0095593Slightly white alabastrum(diploid) 214.780
CNS0095594Slightly white alabastrum(diploid) 315.331
CNS0095595Whole white alabastrum(diploid) 213.111
CNS0095596Whole white alabastrum(diploid) 312.821
CNS0095597Whole white alabastrum(diploid) 413.588
CNS0095598Silvery flower (diploied) 113.965
CNS0095599Silvery flower (diploied) 212.277
CNS0095600Silvery flower (diploied) 328.951
CNS0095601Golden flower (diploid) 116.335
CNS0095602Golden flower (diploid) 230.297
CNS0095603Golden flower (diploid) 331.034
CNS0095604Slightly white alabastrum(tetraploid) 112.772
CNS0095605Slightly white alabastrum(tetraploid) 212.902
CNS0095606Slightly white alabastrum(tetraploid) 322.399
CNS0095607Whole white alabastrum(tetraploid) 112.740
CNS0095608Whole white alabastrum(tetraploid) 213.067
CNS0095609Whole white alabastrum(tetraploid) 315.920
CNS0095610Silvery flower (tetraploid) 121.799
CNS0095611Silvery flower (tetraploid) 222.703
CNS0095612Silvery flower (tetraploid) 324.862
CNS0095613Golden flower (tetraploid) 110.996
CNS0095614Golden flower (tetraploid) 220.144
CNS0095615Golden flower (tetraploid) 324.590
CRA001975CRR073297Stem 118.543
CRR073298Stem 216.711
CRR073299Stem 317.579
CRR073300Leaf 116.291
CRR073301Leaf 218.374
CRR073302Leaf 316.429
CRR073303Juvenile bud 118.741
CRR073304Juvenile bud 218.704
CRR073305Juvenile bud 320.742
CRR073306Third green 114.511
CRR073307Third green 214.620
CRR073308Third green 314.495
CRR073309Second white 117.682
CRR073310Second white 220.292
CRR073311Second white 318.291
CRR073312Silver flowering 116.854
CRR073313Silver flowering 212.575
CRR073314Silver flowering 317.886
CRR073315Gold flowering 110.045
CRR073316Gold flowering 219.000
CRR073317Gold flowering 39.363
CRR073318Tawny withering 129.765
CRR073319Tawny withering 236.507
CRR073320Tawny withering 333.360