Detail information of GWHGAAZE026498


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP25881.11.37243E-31hypothetical protein JCGZ_22911 [Jatropha curcas]
Swissprottr|Q9SB42|MDA1_ARATH2E-13Mediator-associated protein 1
trEMBLtr|A0A067JPI4|A0A067JPI4_JATCU5E-32Uncharacterized protein {ECO:0000313|EMBL:KDP25881.1}
TAIR10AT3G04930.14E-16DNA-binding storekeeper protein-related transcriptional regulator

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene55481325548542-
GWHAAZE00000008mRNA55481325548542-
GWHAAZE00000008exon55481325548542-
GWHAAZE00000008CDS55481325548542-
Transcript Sequence

Network for GWHGAAZE026498

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04504.15DUF573451361.80E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGeBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf2.341
SRR3591706second leaf4.615
SRR3591707mature leaf5.994
SRR3591708Shoot apex3.443
SRR3591709Stem0.996
SRR3591710White floral bud0.961
SRR3591711White flower0.000
SRR3591712Green floral bud1.256
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.464
SRR8316896Juvenile bud stage 1.177
SRR8316897Juvenile bud stage 1.417
SRR8316894Third green stage 0.677
SRR8316900Third green stage 1.676
SRR8316901Third green stage 1.317
SRR8316898Complete white stage 0.194
SRR8316899Complete white stage 0.378
SRR8316903Complete white stage 0.261
SRR8316902Silver flowering stage0.126
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.253
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.017
SRR6706287Light intensity 50%0.357
SRR6706288Light intensity 20%0.242
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.444
CNS0095593Slightly white alabastrum(diploid) 21.760
CNS0095594Slightly white alabastrum(diploid) 32.733
CNS0095595Whole white alabastrum(diploid) 20.810
CNS0095596Whole white alabastrum(diploid) 30.214
CNS0095597Whole white alabastrum(diploid) 41.779
CNS0095598Silvery flower (diploied) 11.084
CNS0095599Silvery flower (diploied) 21.502
CNS0095600Silvery flower (diploied) 30.212
CNS0095601Golden flower (diploid) 10.576
CNS0095602Golden flower (diploid) 20.112
CNS0095603Golden flower (diploid) 30.092
CNS0095604Slightly white alabastrum(tetraploid) 12.409
CNS0095605Slightly white alabastrum(tetraploid) 22.370
CNS0095606Slightly white alabastrum(tetraploid) 33.562
CNS0095607Whole white alabastrum(tetraploid) 12.563
CNS0095608Whole white alabastrum(tetraploid) 21.774
CNS0095609Whole white alabastrum(tetraploid) 31.920
CNS0095610Silvery flower (tetraploid) 10.199
CNS0095611Silvery flower (tetraploid) 20.183
CNS0095612Silvery flower (tetraploid) 30.083
CNS0095613Golden flower (tetraploid) 10.041
CNS0095614Golden flower (tetraploid) 20.161
CNS0095615Golden flower (tetraploid) 30.347
CRA001975CRR073297Stem 10.858
CRR073298Stem 21.301
CRR073299Stem 30.362
CRR073300Leaf 11.029
CRR073301Leaf 20.708
CRR073302Leaf 30.565
CRR073303Juvenile bud 10.253
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.000
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000