Detail information of GWHGAAZE026515


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007011230.11.6564E-106LOB domain-containing protein 15 [Theobroma cacao]
Swissprottr|Q8L5T5|LBD15_ARATH4E-78LOB domain-containing protein 15
trEMBLtr|A0A061FRT3|A0A061FRT3_THECC6E-107LOB domain-containing protein 15 {ECO:0000313|EMBL:EOY20040.1}
TAIR10AT2G40470.11E-60LOB domain-containing protein 15

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene57741995775566+
GWHAAZE00000008mRNA57741995775566+
GWHAAZE00000008exon57741995774465+
GWHAAZE00000008exon57751775775566+
GWHAAZE00000008CDS57741995774465+
GWHAAZE00000008CDS57751775775566+
Transcript Sequence

Network for GWHGAAZE026515

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0121


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03195.15LOB431394.00E-40
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLOB

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.219
SRR3591706second leaf2.626
SRR3591707mature leaf0.183
SRR3591708Shoot apex0.325
SRR3591709Stem14.232
SRR3591710White floral bud5.245
SRR3591711White flower7.539
SRR3591712Green floral bud9.183
SRR3591713Yellow flower11.834
SRP173429 SRR8316895Juvenile bud stage 38.705
SRR8316896Juvenile bud stage 37.774
SRR8316897Juvenile bud stage 9.052
SRR8316894Third green stage 5.858
SRR8316900Third green stage 14.876
SRR8316901Third green stage 13.511
SRR8316898Complete white stage 0.392
SRR8316899Complete white stage 1.135
SRR8316903Complete white stage 0.755
SRR8316902Silver flowering stage0.135
SRR8316904Silver flowering stage0.105
SRR8316905Silver flowering stage0.052
SRR8316906Gold flowering stage 0.061
SRR8316907Gold flowering stage 0.057
SRR8316908Gold flowering stage 1.400
SRP132670SRR6706286Control21.793
SRR6706287Light intensity 50%17.669
SRR6706288Light intensity 20%19.022
CNP0000432CNS0095592Slightly white alabastrum(diploid) 113.701
CNS0095593Slightly white alabastrum(diploid) 24.333
CNS0095594Slightly white alabastrum(diploid) 326.705
CNS0095595Whole white alabastrum(diploid) 22.729
CNS0095596Whole white alabastrum(diploid) 32.347
CNS0095597Whole white alabastrum(diploid) 44.233
CNS0095598Silvery flower (diploied) 13.051
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 31.644
CNS0095601Golden flower (diploid) 11.458
CNS0095602Golden flower (diploid) 22.032
CNS0095603Golden flower (diploid) 31.301
CNS0095604Slightly white alabastrum(tetraploid) 14.799
CNS0095605Slightly white alabastrum(tetraploid) 25.820
CNS0095606Slightly white alabastrum(tetraploid) 32.250
CNS0095607Whole white alabastrum(tetraploid) 10.679
CNS0095608Whole white alabastrum(tetraploid) 20.602
CNS0095609Whole white alabastrum(tetraploid) 330.409
CNS0095610Silvery flower (tetraploid) 10.313
CNS0095611Silvery flower (tetraploid) 20.923
CNS0095612Silvery flower (tetraploid) 30.873
CNS0095613Golden flower (tetraploid) 12.336
CNS0095614Golden flower (tetraploid) 20.909
CNS0095615Golden flower (tetraploid) 30.697
CRA001975CRR073297Stem 136.020
CRR073298Stem 224.180
CRR073299Stem 320.548
CRR073300Leaf 14.143
CRR073301Leaf 24.311
CRR073302Leaf 35.702
CRR073303Juvenile bud 10.375
CRR073304Juvenile bud 20.731
CRR073305Juvenile bud 30.273
CRR073306Third green 10.000
CRR073307Third green 20.210
CRR073308Third green 30.029
CRR073309Second white 10.212
CRR073310Second white 20.202
CRR073311Second white 30.056
CRR073312Silver flowering 10.144
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.141
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 12.242
CRR073319Tawny withering 22.298
CRR073320Tawny withering 34.952