Detail information of GWHGAAZE026584


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010040521.18.44285E-87PREDICTED: putative receptor-like protein kinase At3g47110 [Eucalyptus grandis]
COGYP_001192956.13E-31two component regulator
Swissprottr|C0LGT6|EFR_ARATH3E-51LRR receptor-like serine/threonine-protein kinase EFR (Precursor)
trEMBLtr|A0A067D6K1|A0A067D6K1_CITSI1E-79Uncharacterized protein {ECO:0000313|EMBL:KDO38614.1} (Fragment)
TAIR10AT5G20480.14E-44EF-TU receptor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene68832286886809-
GWHAAZE00000008mRNA68832286886809-
GWHAAZE00000008exon68832286883271-
GWHAAZE00000008exon68836456883983-
GWHAAZE00000008exon68860086886809-
GWHAAZE00000008CDS68860086886809-
GWHAAZE00000008CDS68836456883983-
GWHAAZE00000008CDS68832286883271-
Transcript Sequence

Network for GWHGAAZE026584

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0263


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08263.13LRRNT_236741.00E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.316
SRR3591706second leaf1.360
SRR3591707mature leaf2.314
SRR3591708Shoot apex0.356
SRR3591709Stem1.548
SRR3591710White floral bud0.406
SRR3591711White flower1.305
SRR3591712Green floral bud0.295
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 1.347
SRR8316896Juvenile bud stage 2.140
SRR8316897Juvenile bud stage 1.218
SRR8316894Third green stage 1.970
SRR8316900Third green stage 5.470
SRR8316901Third green stage 3.337
SRR8316898Complete white stage 1.015
SRR8316899Complete white stage 10.779
SRR8316903Complete white stage 2.212
SRR8316902Silver flowering stage0.561
SRR8316904Silver flowering stage0.667
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.179
SRR8316907Gold flowering stage 0.612
SRR8316908Gold flowering stage 0.325
SRP132670SRR6706286Control1.326
SRR6706287Light intensity 50%1.388
SRR6706288Light intensity 20%1.247
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.699
CNS0095593Slightly white alabastrum(diploid) 20.866
CNS0095594Slightly white alabastrum(diploid) 30.605
CNS0095595Whole white alabastrum(diploid) 20.805
CNS0095596Whole white alabastrum(diploid) 30.725
CNS0095597Whole white alabastrum(diploid) 41.491
CNS0095598Silvery flower (diploied) 11.616
CNS0095599Silvery flower (diploied) 20.893
CNS0095600Silvery flower (diploied) 31.005
CNS0095601Golden flower (diploid) 11.605
CNS0095602Golden flower (diploid) 21.192
CNS0095603Golden flower (diploid) 31.039
CNS0095604Slightly white alabastrum(tetraploid) 10.251
CNS0095605Slightly white alabastrum(tetraploid) 20.257
CNS0095606Slightly white alabastrum(tetraploid) 30.735
CNS0095607Whole white alabastrum(tetraploid) 10.098
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.582
CNS0095610Silvery flower (tetraploid) 10.205
CNS0095611Silvery flower (tetraploid) 20.158
CNS0095612Silvery flower (tetraploid) 30.351
CNS0095613Golden flower (tetraploid) 10.002
CNS0095614Golden flower (tetraploid) 20.051
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.528
CRR073298Stem 20.703
CRR073299Stem 30.337
CRR073300Leaf 11.359
CRR073301Leaf 21.481
CRR073302Leaf 30.817
CRR073303Juvenile bud 11.129
CRR073304Juvenile bud 21.100
CRR073305Juvenile bud 31.153
CRR073306Third green 10.000
CRR073307Third green 20.101
CRR073308Third green 30.185
CRR073309Second white 10.364
CRR073310Second white 20.110
CRR073311Second white 30.131
CRR073312Silver flowering 10.143
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.785
CRR073316Gold flowering 21.157
CRR073317Gold flowering 30.426
CRR073318Tawny withering 11.783
CRR073319Tawny withering 21.471
CRR073320Tawny withering 31.818