Detail information of GWHGAAZE026587


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAAU84988.10anthranilate synthase alpha 1 [Camptotheca acuminata]
COGYP_005444340.12E-123anthranilate synthase component I
Swissprottr|P32068|TRPE_ARATH0Anthranilate synthase alpha subunit 1, chloroplastic (Precursor)
trEMBLtr|Q5XLF3|Q5XLF3_CAMAC0Anthranilate synthase alpha 1 {ECO:0000313|EMBL:AAU84988.1}
TAIR10AT5G05730.10anthranilate synthase alpha subunit 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene69726546977693-
GWHAAZE00000008mRNA69726546977693-
GWHAAZE00000008exon69726546973141-
GWHAAZE00000008exon69742116974297-
GWHAAZE00000008exon69744096974489-
GWHAAZE00000008exon69746786974830-
GWHAAZE00000008exon69749106974966-
GWHAAZE00000008exon69750676975119-
GWHAAZE00000008exon69751956975310-
GWHAAZE00000008exon69754076975522-
GWHAAZE00000008exon69757476975898-
GWHAAZE00000008exon69765006976689-
GWHAAZE00000008exon69767806976970-
GWHAAZE00000008exon69775406977693-
GWHAAZE00000008CDS69775406977693-
GWHAAZE00000008CDS69767806976970-
GWHAAZE00000008CDS69765006976689-
GWHAAZE00000008CDS69757476975898-
GWHAAZE00000008CDS69754076975522-
GWHAAZE00000008CDS69751956975310-
GWHAAZE00000008CDS69750676975119-
GWHAAZE00000008CDS69749106974966-
GWHAAZE00000008CDS69746786974830-
GWHAAZE00000008CDS69744096974489-
GWHAAZE00000008CDS69742116974297-
GWHAAZE00000008CDS69727766973141-
GWHAAZE00000008three_prime_UTR69726546972775-
Transcript Sequence

Network for GWHGAAZE026587

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04715.14Anth_synt_I_N792331.30E-27
PF00425.19Chorismate_bind3035391.30E-72
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01657trpE Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Biosynthesis of amino acidsmap01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400
Phenazine biosynthesismap00405
Quorum sensingmap02024
Biofilm formation - Pseudomonas aeruginosamap02025

Gene Ontology

GO term OntologyName
GO:0009058biological_processbiosynthetic process

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.373
SRR3591706second leaf19.709
SRR3591707mature leaf10.638
SRR3591708Shoot apex25.072
SRR3591709Stem1.367
SRR3591710White floral bud15.851
SRR3591711White flower4.362
SRR3591712Green floral bud37.418
SRR3591713Yellow flower3.005
SRP173429 SRR8316895Juvenile bud stage 19.929
SRR8316896Juvenile bud stage 25.742
SRR8316897Juvenile bud stage 12.499
SRR8316894Third green stage 10.817
SRR8316900Third green stage 38.558
SRR8316901Third green stage 39.575
SRR8316898Complete white stage 4.589
SRR8316899Complete white stage 39.640
SRR8316903Complete white stage 7.128
SRR8316902Silver flowering stage1.532
SRR8316904Silver flowering stage1.717
SRR8316905Silver flowering stage0.717
SRR8316906Gold flowering stage 2.099
SRR8316907Gold flowering stage 1.190
SRR8316908Gold flowering stage 1.161
SRP132670SRR6706286Control22.594
SRR6706287Light intensity 50%23.499
SRR6706288Light intensity 20%27.362
CNP0000432CNS0095592Slightly white alabastrum(diploid) 111.191
CNS0095593Slightly white alabastrum(diploid) 212.587
CNS0095594Slightly white alabastrum(diploid) 313.103
CNS0095595Whole white alabastrum(diploid) 27.779
CNS0095596Whole white alabastrum(diploid) 310.433
CNS0095597Whole white alabastrum(diploid) 46.601
CNS0095598Silvery flower (diploied) 14.526
CNS0095599Silvery flower (diploied) 24.819
CNS0095600Silvery flower (diploied) 34.812
CNS0095601Golden flower (diploid) 14.144
CNS0095602Golden flower (diploid) 23.948
CNS0095603Golden flower (diploid) 33.897
CNS0095604Slightly white alabastrum(tetraploid) 117.846
CNS0095605Slightly white alabastrum(tetraploid) 217.296
CNS0095606Slightly white alabastrum(tetraploid) 331.480
CNS0095607Whole white alabastrum(tetraploid) 16.296
CNS0095608Whole white alabastrum(tetraploid) 24.789
CNS0095609Whole white alabastrum(tetraploid) 332.608
CNS0095610Silvery flower (tetraploid) 11.753
CNS0095611Silvery flower (tetraploid) 22.711
CNS0095612Silvery flower (tetraploid) 31.511
CNS0095613Golden flower (tetraploid) 10.688
CNS0095614Golden flower (tetraploid) 22.274
CNS0095615Golden flower (tetraploid) 30.869
CRA001975CRR073297Stem 131.517
CRR073298Stem 230.605
CRR073299Stem 324.706
CRR073300Leaf 148.290
CRR073301Leaf 238.299
CRR073302Leaf 333.308
CRR073303Juvenile bud 123.462
CRR073304Juvenile bud 225.019
CRR073305Juvenile bud 325.140
CRR073306Third green 10.884
CRR073307Third green 20.758
CRR073308Third green 30.853
CRR073309Second white 10.149
CRR073310Second white 20.137
CRR073311Second white 30.000
CRR073312Silver flowering 10.249
CRR073313Silver flowering 20.245
CRR073314Silver flowering 30.145
CRR073315Gold flowering 12.862
CRR073316Gold flowering 25.143
CRR073317Gold flowering 35.073
CRR073318Tawny withering 10.340
CRR073319Tawny withering 20.815
CRR073320Tawny withering 30.544