Detail information of GWHGAAZE026636


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011076786.10PREDICTED: mannose-1-phosphate guanylyltransferase 1 [Sesamum indicum]
COGYP_644397.17E-56nucleotidyl transferase
Swissprottr|O22287|GMPP1_ARATH0Mannose-1-phosphate guanylyltransferase 1
trEMBLtr|A0A068TV30|A0A068TV30_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_4 {ECO:0000313|EMBL:CDP00140.1}
TAIR10AT2G39770.20Glucose-1-phosphate adenylyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene78615987864234-
GWHAAZE00000008mRNA78615987864234-
GWHAAZE00000008exon78615987862269-
GWHAAZE00000008exon78628127863051-
GWHAAZE00000008exon78631307863192-
GWHAAZE00000008exon78641247864234-
GWHAAZE00000008CDS78641247864234-
GWHAAZE00000008CDS78631307863192-
GWHAAZE00000008CDS78628127863051-
GWHAAZE00000008CDS78615987862269-
Transcript Sequence

Network for GWHGAAZE026636

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00483.24NTP_transferase22291.50E-53
PF00132.25Hexapep2602957.20E-08
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00966GMPP Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Fructose and mannose metabolismmap00051
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0009058biological_processbiosynthetic process
GO:0016779molecular_functionnucleotidyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf68.836
SRR3591706second leaf66.708
SRR3591707mature leaf91.606
SRR3591708Shoot apex60.331
SRR3591709Stem65.065
SRR3591710White floral bud66.780
SRR3591711White flower58.593
SRR3591712Green floral bud62.937
SRR3591713Yellow flower49.963
SRP173429 SRR8316895Juvenile bud stage 21.154
SRR8316896Juvenile bud stage 41.840
SRR8316897Juvenile bud stage 15.754
SRR8316894Third green stage 19.131
SRR8316900Third green stage 49.400
SRR8316901Third green stage 50.689
SRR8316898Complete white stage 27.538
SRR8316899Complete white stage 95.632
SRR8316903Complete white stage 43.849
SRR8316902Silver flowering stage19.066
SRR8316904Silver flowering stage30.835
SRR8316905Silver flowering stage18.025
SRR8316906Gold flowering stage 48.593
SRR8316907Gold flowering stage 46.372
SRR8316908Gold flowering stage 47.687
SRP132670SRR6706286Control66.704
SRR6706287Light intensity 50%65.658
SRR6706288Light intensity 20%65.786
CNP0000432CNS0095592Slightly white alabastrum(diploid) 136.759
CNS0095593Slightly white alabastrum(diploid) 238.172
CNS0095594Slightly white alabastrum(diploid) 333.115
CNS0095595Whole white alabastrum(diploid) 233.030
CNS0095596Whole white alabastrum(diploid) 331.678
CNS0095597Whole white alabastrum(diploid) 439.743
CNS0095598Silvery flower (diploied) 157.872
CNS0095599Silvery flower (diploied) 246.054
CNS0095600Silvery flower (diploied) 364.475
CNS0095601Golden flower (diploid) 155.975
CNS0095602Golden flower (diploid) 268.443
CNS0095603Golden flower (diploid) 365.947
CNS0095604Slightly white alabastrum(tetraploid) 142.897
CNS0095605Slightly white alabastrum(tetraploid) 234.372
CNS0095606Slightly white alabastrum(tetraploid) 380.248
CNS0095607Whole white alabastrum(tetraploid) 134.246
CNS0095608Whole white alabastrum(tetraploid) 226.499
CNS0095609Whole white alabastrum(tetraploid) 347.784
CNS0095610Silvery flower (tetraploid) 175.607
CNS0095611Silvery flower (tetraploid) 2103.311
CNS0095612Silvery flower (tetraploid) 373.619
CNS0095613Golden flower (tetraploid) 157.730
CNS0095614Golden flower (tetraploid) 255.154
CNS0095615Golden flower (tetraploid) 382.647
CRA001975CRR073297Stem 161.928
CRR073298Stem 260.224
CRR073299Stem 369.352
CRR073300Leaf 174.632
CRR073301Leaf 272.815
CRR073302Leaf 364.390
CRR073303Juvenile bud 169.775
CRR073304Juvenile bud 258.950
CRR073305Juvenile bud 372.037
CRR073306Third green 146.781
CRR073307Third green 241.092
CRR073308Third green 346.069
CRR073309Second white 130.994
CRR073310Second white 226.858
CRR073311Second white 328.491
CRR073312Silver flowering 131.360
CRR073313Silver flowering 224.397
CRR073314Silver flowering 326.121
CRR073315Gold flowering 165.004
CRR073316Gold flowering 276.820
CRR073317Gold flowering 384.549
CRR073318Tawny withering 156.438
CRR073319Tawny withering 239.447
CRR073320Tawny withering 355.189