Detail information of GWHGAAZE026714


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO67783.11.25148E-67hypothetical protein CISIN_1g027907mg [Citrus sinensis]
COGYP_720298.10.00000007glutaredoxin
Swissprottr|Q9FRL8|DHAR2_ARATH4E-55Glutathione S-transferase DHAR2
trEMBLtr|A0A067FKB5|A0A067FKB5_CITSI5E-68Uncharacterized protein {ECO:0000313|EMBL:KDO67783.1}
TAIR10AT1G75270.19E-45dehydroascorbate reductase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene90504419052341-
GWHAAZE00000008mRNA90504419052341-
GWHAAZE00000008exon90522819052341-
GWHAAZE00000008exon90520899052179-
GWHAAZE00000008exon90507179050834-
GWHAAZE00000008exon90504419050593-
GWHAAZE00000008CDS90522819052341-
GWHAAZE00000008CDS90520899052179-
GWHAAZE00000008CDS90507179050834-
GWHAAZE00000008CDS90504419050593-
Transcript Sequence

Network for GWHGAAZE026714

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0041


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13417.7GST_N_320571.20E-06
PF13410.7GST_C_2731375.50E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K21888DHAR Metabolic pathways map01100
Ascorbate and aldarate metabolismmap00053
Glutathione metabolismmap00480

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf164.601
SRR3591706second leaf137.733
SRR3591707mature leaf132.014
SRR3591708Shoot apex114.979
SRR3591709Stem229.153
SRR3591710White floral bud313.564
SRR3591711White flower347.404
SRR3591712Green floral bud289.807
SRR3591713Yellow flower253.121
SRP173429 SRR8316895Juvenile bud stage 181.218
SRR8316896Juvenile bud stage 259.994
SRR8316897Juvenile bud stage 148.483
SRR8316894Third green stage 93.824
SRR8316900Third green stage 328.550
SRR8316901Third green stage 352.682
SRR8316898Complete white stage 282.901
SRR8316899Complete white stage 481.005
SRR8316903Complete white stage 334.585
SRR8316902Silver flowering stage254.886
SRR8316904Silver flowering stage279.304
SRR8316905Silver flowering stage152.281
SRR8316906Gold flowering stage 517.612
SRR8316907Gold flowering stage 508.934
SRR8316908Gold flowering stage 490.122
SRP132670SRR6706286Control398.437
SRR6706287Light intensity 50%383.909
SRR6706288Light intensity 20%394.324
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1251.777
CNS0095593Slightly white alabastrum(diploid) 2251.606
CNS0095594Slightly white alabastrum(diploid) 3252.095
CNS0095595Whole white alabastrum(diploid) 2240.004
CNS0095596Whole white alabastrum(diploid) 3222.954
CNS0095597Whole white alabastrum(diploid) 4223.904
CNS0095598Silvery flower (diploied) 1300.382
CNS0095599Silvery flower (diploied) 2306.206
CNS0095600Silvery flower (diploied) 3551.601
CNS0095601Golden flower (diploid) 1271.326
CNS0095602Golden flower (diploid) 2409.010
CNS0095603Golden flower (diploid) 3394.809
CNS0095604Slightly white alabastrum(tetraploid) 1275.629
CNS0095605Slightly white alabastrum(tetraploid) 2247.122
CNS0095606Slightly white alabastrum(tetraploid) 3307.070
CNS0095607Whole white alabastrum(tetraploid) 1233.062
CNS0095608Whole white alabastrum(tetraploid) 2228.591
CNS0095609Whole white alabastrum(tetraploid) 3336.091
CNS0095610Silvery flower (tetraploid) 1655.773
CNS0095611Silvery flower (tetraploid) 2649.254
CNS0095612Silvery flower (tetraploid) 3747.407
CNS0095613Golden flower (tetraploid) 1513.778
CNS0095614Golden flower (tetraploid) 2566.613
CNS0095615Golden flower (tetraploid) 3438.067
CRA001975CRR073297Stem 1319.617
CRR073298Stem 2326.204
CRR073299Stem 3507.343
CRR073300Leaf 1364.832
CRR073301Leaf 2413.139
CRR073302Leaf 3402.031
CRR073303Juvenile bud 1545.852
CRR073304Juvenile bud 2555.963
CRR073305Juvenile bud 3542.377
CRR073306Third green 1833.146
CRR073307Third green 2764.066
CRR073308Third green 3728.249
CRR073309Second white 1792.159
CRR073310Second white 2557.517
CRR073311Second white 3394.185
CRR073312Silver flowering 1390.296
CRR073313Silver flowering 2538.658
CRR073314Silver flowering 3404.977
CRR073315Gold flowering 1322.402
CRR073316Gold flowering 2276.226
CRR073317Gold flowering 3288.043
CRR073318Tawny withering 1357.851
CRR073319Tawny withering 2334.732
CRR073320Tawny withering 3360.019