Detail information of GWHGAAZE026718


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP19954.14.1457E-134unnamed protein product [Coffea canephora]
COGYP_003571913.15E-37lysophospholipase
Swissprottr|Q9C942|CSE_ARATH3E-44Caffeoylshikimate esterase
trEMBLtr|A0A068VH95|A0A068VH95_COFCA2E-134Coffea canephora DH200=94 genomic scaffold, scaffold_803 {ECO:0000313|EMBL:CDP19954.1}
TAIR10AT2G39420.14E-101alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene91027019107163-
GWHAAZE00000008mRNA91027019107163-
GWHAAZE00000008exon91027019102886-
GWHAAZE00000008exon91030209103118-
GWHAAZE00000008exon91031979103334-
GWHAAZE00000008exon91059359106065-
GWHAAZE00000008exon91064739106562-
GWHAAZE00000008exon91067549106836-
GWHAAZE00000008exon91070309107163-
GWHAAZE00000008CDS91070309107163-
GWHAAZE00000008CDS91067549106836-
GWHAAZE00000008CDS91064739106562-
GWHAAZE00000008CDS91059359106065-
GWHAAZE00000008CDS91031979103334-
GWHAAZE00000008CDS91030209103118-
GWHAAZE00000008CDS91027019102886-
Transcript Sequence

Network for GWHGAAZE026718

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12146.9Hydrolase_4712716.60E-53
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K01054MGLL Metabolic pathways map01100
Glycerolipid metabolismmap00561
Regulation of lipolysis in adipocytesmap04923
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.587
SRR3591706second leaf1.420
SRR3591707mature leaf0.935
SRR3591708Shoot apex1.473
SRR3591709Stem1.442
SRR3591710White floral bud33.482
SRR3591711White flower442.571
SRR3591712Green floral bud17.717
SRR3591713Yellow flower504.406
SRP173429 SRR8316895Juvenile bud stage 10.643
SRR8316896Juvenile bud stage 12.252
SRR8316897Juvenile bud stage 7.404
SRR8316894Third green stage 3.013
SRR8316900Third green stage 14.733
SRR8316901Third green stage 17.315
SRR8316898Complete white stage 1.533
SRR8316899Complete white stage 3.757
SRR8316903Complete white stage 1.665
SRR8316902Silver flowering stage1158.792
SRR8316904Silver flowering stage1408.102
SRR8316905Silver flowering stage1003.210
SRR8316906Gold flowering stage 4526.138
SRR8316907Gold flowering stage 3651.830
SRR8316908Gold flowering stage 3557.659
SRP132670SRR6706286Control9.079
SRR6706287Light intensity 50%8.774
SRR6706288Light intensity 20%8.090
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.066
CNS0095593Slightly white alabastrum(diploid) 219.923
CNS0095594Slightly white alabastrum(diploid) 318.898
CNS0095595Whole white alabastrum(diploid) 219.836
CNS0095596Whole white alabastrum(diploid) 318.866
CNS0095597Whole white alabastrum(diploid) 413.583
CNS0095598Silvery flower (diploied) 165.631
CNS0095599Silvery flower (diploied) 264.901
CNS0095600Silvery flower (diploied) 3356.650
CNS0095601Golden flower (diploid) 186.444
CNS0095602Golden flower (diploid) 2231.118
CNS0095603Golden flower (diploid) 3235.891
CNS0095604Slightly white alabastrum(tetraploid) 125.052
CNS0095605Slightly white alabastrum(tetraploid) 224.214
CNS0095606Slightly white alabastrum(tetraploid) 315.309
CNS0095607Whole white alabastrum(tetraploid) 129.609
CNS0095608Whole white alabastrum(tetraploid) 239.396
CNS0095609Whole white alabastrum(tetraploid) 325.298
CNS0095610Silvery flower (tetraploid) 1337.842
CNS0095611Silvery flower (tetraploid) 2299.913
CNS0095612Silvery flower (tetraploid) 32066.383
CNS0095613Golden flower (tetraploid) 1799.259
CNS0095614Golden flower (tetraploid) 2429.027
CNS0095615Golden flower (tetraploid) 31366.755
CRA001975CRR073297Stem 116.571
CRR073298Stem 29.281
CRR073299Stem 33.021
CRR073300Leaf 110.002
CRR073301Leaf 213.705
CRR073302Leaf 36.817
CRR073303Juvenile bud 19.053
CRR073304Juvenile bud 26.794
CRR073305Juvenile bud 32.745
CRR073306Third green 11345.945
CRR073307Third green 21110.545
CRR073308Third green 31122.691
CRR073309Second white 11805.834
CRR073310Second white 22375.856
CRR073311Second white 32084.182
CRR073312Silver flowering 11256.209
CRR073313Silver flowering 2849.873
CRR073314Silver flowering 3995.203
CRR073315Gold flowering 11.314
CRR073316Gold flowering 20.239
CRR073317Gold flowering 30.965
CRR073318Tawny withering 13.487
CRR073319Tawny withering 28.592
CRR073320Tawny withering 32.335