Gene detail

Detail information of GWHGAAZE026741

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010253459.1	2.6551E-150	PREDICTED: probable adenylate kinase 1, chloroplastic [Nelumbo nucifera]
COG	YP_008431754.1	2E-46	adenylate kinase
Swissprot	tr\|Q10S93\|KAD1_ORYSJ	2E-132	Probable adenylate kinase 1, chloroplastic (Precursor)
trEMBL	tr\|A0A061FN26\|A0A061FN26_THECC	4E-150	Adenosine kinase {ECO:0000313\|EMBL:EOY18486.1}
TAIR10	AT2G37250.1	3E-105	adenosine kinase

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	9395402	9401238	-
GWHAAZE00000008	mRNA	9395402	9401238	-
GWHAAZE00000008	exon	9395402	9395545	-
GWHAAZE00000008	exon	9396506	9396778	-
GWHAAZE00000008	exon	9397541	9397681	-
GWHAAZE00000008	exon	9400942	9401238	-
GWHAAZE00000008	CDS	9400942	9401238	-
GWHAAZE00000008	CDS	9397541	9397681	-
GWHAAZE00000008	CDS	9396506	9396778	-
GWHAAZE00000008	CDS	9395402	9395545	-

Transcript Sequence
>GWHTAAZE026775 ATGGCGGTCTTGAACCGCCTTTTTATAGCTAGAGCCTCCTCCCTCACCTTCCATTCAATTCGCACCCTCTACTTTTCTTCTTCTTCTTTAAATTCCGAAATTGGGGTCGGCCACAAGCCCCATCTCCCTCCTCTAGAAAATAAAGAGAAAAATGTGCAATGGGTATTCCTGGGTTGCCCCGGGGTCGGAAAGGGTACATATGCGGGTCGCCTCTCTAATCTCCTCGGCGTTCCTCACATCGCCACCGGCGATCTTGTCCGTGATGAGCTCTCTTGTGGAGGCCCCCTTTCTTCTCAGCTTGAAGAGATAGTTAGCCAAGGGCAATTGGTTTCAGATGAAATTATAATAAAGTTATTGTCTAAGCGCTTGGAAGCTGGAGAAGCCAGGGGTGAATCCGGATTTATTCTTGATGGCTTCCCTCGGACCATTAGGCAGGCAGAAATTTTAGAGGGAGTGACTGATATTGACTTGGTGATAAATTTGAAGCTTCGGGAAGAAGCATTGCTTGCAAAATGCCTTGGAAGAAGAATTTGTAGCGAGTGCGGAGGGAATTATAATGTAGCGTGCATCGACATCAAGGGTGAAAAGGGAAAGCCTGGAATATATATGGCTCCCCTCCCGCCCCCTACACATTGTGAATCCAAACTAATTACTCGGTCTGATGACACTGAAGACGTCGTAAAGGAGCGCCTCCGTGTATACGATGAAATGAGCCGGCCAGTAGAGGAGTTCTATCGGAGTCGAGGAAAGTTATTAGAGTTCGACCTTCCTGGAGGAATCCCAGAATCGTGGCCGAAACTGCTTCGAGCTCTGAATCTTGACGATACCGAGGACAAAAAGTCAGCAGCAGCTTGA

Network for GWHGAAZE026741

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00406.23	ADK	57	249	1.60E-37

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00939	adk, AK	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Purine metabolism	map00230
		Thiamine metabolism	map00730

Gene Ontology

GO term	Ontology	Name
GO:0006139	biological_process	nucleobase-containing compound metabolic process
GO:0005524	molecular_function	ATP binding
GO:0019205	molecular_function	nucleobase-containing compound kinase activity
GO:0004017	molecular_function	adenylate kinase activity
GO:0016776	molecular_function	phosphotransferase activity, phosphate group as acceptor

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	39.146
	SRR3591706	second leaf	25.182
	SRR3591707	mature leaf	27.192
	SRR3591708	Shoot apex	30.188
	SRR3591709	Stem	36.928
	SRR3591710	White floral bud	62.320
	SRR3591711	White flower	89.987
	SRR3591712	Green floral bud	50.550
	SRR3591713	Yellow flower	81.303
SRP173429	SRR8316895	Juvenile bud stage	31.222
	SRR8316896	Juvenile bud stage	63.490
	SRR8316897	Juvenile bud stage	23.713
	SRR8316894	Third green stage	22.031
	SRR8316900	Third green stage	59.926
	SRR8316901	Third green stage	78.728
	SRR8316898	Complete white stage	30.791
	SRR8316899	Complete white stage	81.721
	SRR8316903	Complete white stage	57.681
	SRR8316902	Silver flowering stage	41.120
	SRR8316904	Silver flowering stage	47.811
	SRR8316905	Silver flowering stage	26.339
	SRR8316906	Gold flowering stage	93.208
	SRR8316907	Gold flowering stage	91.765
	SRR8316908	Gold flowering stage	82.049
SRP132670	SRR6706286	Control	50.319
	SRR6706287	Light intensity 50%	51.261
	SRR6706288	Light intensity 20%	47.952
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	55.822
	CNS0095593	Slightly white alabastrum(diploid) 2	58.725
	CNS0095594	Slightly white alabastrum(diploid) 3	65.524
	CNS0095595	Whole white alabastrum(diploid) 2	69.892
	CNS0095596	Whole white alabastrum(diploid) 3	71.544
	CNS0095597	Whole white alabastrum(diploid) 4	72.705
	CNS0095598	Silvery flower (diploied) 1	44.026
	CNS0095599	Silvery flower (diploied) 2	50.818
	CNS0095600	Silvery flower (diploied) 3	62.071
	CNS0095601	Golden flower (diploid) 1	40.490
	CNS0095602	Golden flower (diploid) 2	51.523
	CNS0095603	Golden flower (diploid) 3	60.238
	CNS0095604	Slightly white alabastrum(tetraploid) 1	52.287
	CNS0095605	Slightly white alabastrum(tetraploid) 2	54.645
	CNS0095606	Slightly white alabastrum(tetraploid) 3	54.823
	CNS0095607	Whole white alabastrum(tetraploid) 1	59.362
	CNS0095608	Whole white alabastrum(tetraploid) 2	60.400
	CNS0095609	Whole white alabastrum(tetraploid) 3	54.475
	CNS0095610	Silvery flower (tetraploid) 1	70.924
	CNS0095611	Silvery flower (tetraploid) 2	54.120
	CNS0095612	Silvery flower (tetraploid) 3	49.651
	CNS0095613	Golden flower (tetraploid) 1	45.287
	CNS0095614	Golden flower (tetraploid) 2	51.946
	CNS0095615	Golden flower (tetraploid) 3	53.817
CRA001975	CRR073297	Stem 1	57.165
	CRR073298	Stem 2	57.325
	CRR073299	Stem 3	59.457
	CRR073300	Leaf 1	65.474
	CRR073301	Leaf 2	67.941
	CRR073302	Leaf 3	61.671
	CRR073303	Juvenile bud 1	62.541
	CRR073304	Juvenile bud 2	62.783
	CRR073305	Juvenile bud 3	51.381
	CRR073306	Third green 1	67.556
	CRR073307	Third green 2	65.609
	CRR073308	Third green 3	58.022
	CRR073309	Second white 1	73.237
	CRR073310	Second white 2	61.363
	CRR073311	Second white 3	51.197
	CRR073312	Silver flowering 1	62.457
	CRR073313	Silver flowering 2	61.015
	CRR073314	Silver flowering 3	59.028
	CRR073315	Gold flowering 1	47.660
	CRR073316	Gold flowering 2	43.194
	CRR073317	Gold flowering 3	36.888
	CRR073318	Tawny withering 1	42.207
	CRR073319	Tawny withering 2	67.106
	CRR073320	Tawny withering 3	32.434