Detail information of GWHGAAZE026784


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006830263.13.67377E-20hypothetical protein AMTR_s00130p00113100 [Amborella trichopoda]
Swissprottr|Q9LXT3|MBF1B_ARATH4E-20Multiprotein-bridging factor 1b
trEMBLtr|W1NSB0|W1NSB0_AMBTC1E-20Uncharacterized protein {ECO:0000313|EMBL:ERM97679.1}
TAIR10AT3G58680.14E-16multiprotein bridging factor 1B

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1005613410056553-
GWHAAZE00000008mRNA1005613410056553-
GWHAAZE00000008exon1005613410056172-
GWHAAZE00000008exon1005641310056553-
GWHAAZE00000008CDS1005641310056553-
GWHAAZE00000008CDS1005613410056172-
Transcript Sequence

Network for GWHGAAZE026784

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08523.11MBF19468.90E-11
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMBF1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf62.510
SRR3591706second leaf42.902
SRR3591707mature leaf90.722
SRR3591708Shoot apex39.630
SRR3591709Stem69.111
SRR3591710White floral bud65.189
SRR3591711White flower98.821
SRR3591712Green floral bud57.604
SRR3591713Yellow flower81.171
SRP173429 SRR8316895Juvenile bud stage 0.936
SRR8316896Juvenile bud stage 1.078
SRR8316897Juvenile bud stage 25.791
SRR8316894Third green stage 1.338
SRR8316900Third green stage 1.485
SRR8316901Third green stage 3.232
SRR8316898Complete white stage 1.047
SRR8316899Complete white stage 5.585
SRR8316903Complete white stage 2.335
SRR8316902Silver flowering stage1.642
SRR8316904Silver flowering stage3.263
SRR8316905Silver flowering stage2.244
SRR8316906Gold flowering stage 9.649
SRR8316907Gold flowering stage 7.860
SRR8316908Gold flowering stage 88.086
SRP132670SRR6706286Control3.186
SRR6706287Light intensity 50%5.046
SRR6706288Light intensity 20%4.201
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.282
CNS0095593Slightly white alabastrum(diploid) 21.103
CNS0095594Slightly white alabastrum(diploid) 31.975
CNS0095595Whole white alabastrum(diploid) 21.326
CNS0095596Whole white alabastrum(diploid) 33.019
CNS0095597Whole white alabastrum(diploid) 43.883
CNS0095598Silvery flower (diploied) 15.608
CNS0095599Silvery flower (diploied) 23.731
CNS0095600Silvery flower (diploied) 34.143
CNS0095601Golden flower (diploid) 13.771
CNS0095602Golden flower (diploid) 22.688
CNS0095603Golden flower (diploid) 31.117
CNS0095604Slightly white alabastrum(tetraploid) 142.533
CNS0095605Slightly white alabastrum(tetraploid) 248.275
CNS0095606Slightly white alabastrum(tetraploid) 377.424
CNS0095607Whole white alabastrum(tetraploid) 134.533
CNS0095608Whole white alabastrum(tetraploid) 234.625
CNS0095609Whole white alabastrum(tetraploid) 360.750
CNS0095610Silvery flower (tetraploid) 1138.935
CNS0095611Silvery flower (tetraploid) 2129.013
CNS0095612Silvery flower (tetraploid) 3139.371
CNS0095613Golden flower (tetraploid) 1130.915
CNS0095614Golden flower (tetraploid) 2122.668
CNS0095615Golden flower (tetraploid) 3133.134
CRA001975CRR073297Stem 13.232
CRR073298Stem 22.240
CRR073299Stem 32.328
CRR073300Leaf 10.482
CRR073301Leaf 21.910
CRR073302Leaf 32.057
CRR073303Juvenile bud 11.525
CRR073304Juvenile bud 20.522
CRR073305Juvenile bud 31.582
CRR073306Third green 10.197
CRR073307Third green 20.083
CRR073308Third green 32.080
CRR073309Second white 10.517
CRR073310Second white 20.842
CRR073311Second white 31.394
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.067
CRR073315Gold flowering 10.917
CRR073316Gold flowering 22.178
CRR073317Gold flowering 30.697
CRR073318Tawny withering 11.909
CRR073319Tawny withering 22.237
CRR073320Tawny withering 31.128