Detail information of GWHGAAZE026791


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP37750.18.90785E-92hypothetical protein JCGZ_05240 [Jatropha curcas]
Swissprottr|Q9FPR3|EDR1_ARATH6E-14Serine/threonine-protein kinase EDR1
trEMBLtr|A0A067KZU8|A0A067KZU8_JATCU3E-92Uncharacterized protein {ECO:0000313|EMBL:KDP37750.1}
TAIR10AT3G58640.25E-66Mitogen activated protein kinase kinase kinase-related

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1013524910138616+
GWHAAZE00000008mRNA1013524910138616+
GWHAAZE00000008exon1013524910135316+
GWHAAZE00000008exon1013633810136452+
GWHAAZE00000008exon1013749810137783+
GWHAAZE00000008exon1013799110138114+
GWHAAZE00000008exon1013854110138616+
GWHAAZE00000008CDS1013524910135316+
GWHAAZE00000008CDS1013633810136452+
GWHAAZE00000008CDS1013749810137783+
GWHAAZE00000008CDS1013799110138114+
GWHAAZE00000008CDS1013854110138616+
Transcript Sequence

Network for GWHGAAZE026791

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr1492041.00E-07
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL_CTR1-DRK-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE026791.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 305101520253035404550556065Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf57.694
SRR3591706second leaf31.508
SRR3591707mature leaf25.394
SRR3591708Shoot apex39.592
SRR3591709Stem48.516
SRR3591710White floral bud20.418
SRR3591711White flower29.034
SRR3591712Green floral bud24.311
SRR3591713Yellow flower24.401
SRP173429 SRR8316895Juvenile bud stage 19.151
SRR8316896Juvenile bud stage 24.242
SRR8316897Juvenile bud stage 12.376
SRR8316894Third green stage 14.852
SRR8316900Third green stage 38.888
SRR8316901Third green stage 40.861
SRR8316898Complete white stage 12.273
SRR8316899Complete white stage 40.878
SRR8316903Complete white stage 19.171
SRR8316902Silver flowering stage9.989
SRR8316904Silver flowering stage19.595
SRR8316905Silver flowering stage5.769
SRR8316906Gold flowering stage 20.265
SRR8316907Gold flowering stage 15.185
SRR8316908Gold flowering stage 23.622
SRP132670SRR6706286Control20.032
SRR6706287Light intensity 50%21.901
SRR6706288Light intensity 20%24.855
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.338
CNS0095593Slightly white alabastrum(diploid) 224.008
CNS0095594Slightly white alabastrum(diploid) 316.394
CNS0095595Whole white alabastrum(diploid) 218.003
CNS0095596Whole white alabastrum(diploid) 314.898
CNS0095597Whole white alabastrum(diploid) 419.970
CNS0095598Silvery flower (diploied) 128.367
CNS0095599Silvery flower (diploied) 215.772
CNS0095600Silvery flower (diploied) 322.097
CNS0095601Golden flower (diploid) 116.056
CNS0095602Golden flower (diploid) 220.104
CNS0095603Golden flower (diploid) 322.358
CNS0095604Slightly white alabastrum(tetraploid) 128.274
CNS0095605Slightly white alabastrum(tetraploid) 222.784
CNS0095606Slightly white alabastrum(tetraploid) 352.093
CNS0095607Whole white alabastrum(tetraploid) 114.939
CNS0095608Whole white alabastrum(tetraploid) 213.281
CNS0095609Whole white alabastrum(tetraploid) 335.423
CNS0095610Silvery flower (tetraploid) 136.534
CNS0095611Silvery flower (tetraploid) 231.450
CNS0095612Silvery flower (tetraploid) 325.491
CNS0095613Golden flower (tetraploid) 115.060
CNS0095614Golden flower (tetraploid) 223.984
CNS0095615Golden flower (tetraploid) 314.929
CRA001975CRR073297Stem 122.957
CRR073298Stem 217.330
CRR073299Stem 319.254
CRR073300Leaf 130.118
CRR073301Leaf 222.612
CRR073302Leaf 323.879
CRR073303Juvenile bud 131.090
CRR073304Juvenile bud 219.329
CRR073305Juvenile bud 330.672
CRR073306Third green 18.234
CRR073307Third green 210.156
CRR073308Third green 36.762
CRR073309Second white 16.469
CRR073310Second white 27.569
CRR073311Second white 39.126
CRR073312Silver flowering 12.717
CRR073313Silver flowering 22.815
CRR073314Silver flowering 32.435
CRR073315Gold flowering 111.089
CRR073316Gold flowering 218.705
CRR073317Gold flowering 37.337
CRR073318Tawny withering 125.558
CRR073319Tawny withering 222.633
CRR073320Tawny withering 324.708