Detail information of GWHGAAZE026813


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010657020.11.38578E-67PREDICTED: transcription factor TCP4 [Vitis vinifera]
Swissprottr|Q9MAH8|TCP3_ARATH6E-45Transcription factor TCP3
trEMBLtr|B9MW22|B9MW22_POPTR1E-67Uncharacterized protein {ECO:0000313|EMBL:ERP54157.1}
TAIR10AT1G53230.16E-28TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1041268910413486+
GWHAAZE00000008mRNA1041268910413486+
GWHAAZE00000008exon1041268910413486+
GWHAAZE00000008CDS1041268910413486+
Transcript Sequence

Network for GWHGAAZE026813

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03634.14TCP261091.20E-29
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTCP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.835
SRR3591706second leaf5.647
SRR3591707mature leaf8.442
SRR3591708Shoot apex3.111
SRR3591709Stem6.436
SRR3591710White floral bud6.688
SRR3591711White flower7.767
SRR3591712Green floral bud8.516
SRR3591713Yellow flower10.649
SRP173429 SRR8316895Juvenile bud stage 4.813
SRR8316896Juvenile bud stage 9.168
SRR8316897Juvenile bud stage 2.259
SRR8316894Third green stage 1.497
SRR8316900Third green stage 2.843
SRR8316901Third green stage 3.540
SRR8316898Complete white stage 2.497
SRR8316899Complete white stage 4.703
SRR8316903Complete white stage 5.963
SRR8316902Silver flowering stage1.675
SRR8316904Silver flowering stage3.688
SRR8316905Silver flowering stage1.825
SRR8316906Gold flowering stage 11.988
SRR8316907Gold flowering stage 7.898
SRR8316908Gold flowering stage 7.181
SRP132670SRR6706286Control4.960
SRR6706287Light intensity 50%2.391
SRR6706288Light intensity 20%2.777
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.866
CNS0095593Slightly white alabastrum(diploid) 25.776
CNS0095594Slightly white alabastrum(diploid) 310.212
CNS0095595Whole white alabastrum(diploid) 29.367
CNS0095596Whole white alabastrum(diploid) 39.998
CNS0095597Whole white alabastrum(diploid) 410.651
CNS0095598Silvery flower (diploied) 124.805
CNS0095599Silvery flower (diploied) 213.514
CNS0095600Silvery flower (diploied) 37.707
CNS0095601Golden flower (diploid) 119.375
CNS0095602Golden flower (diploid) 213.538
CNS0095603Golden flower (diploid) 314.253
CNS0095604Slightly white alabastrum(tetraploid) 111.159
CNS0095605Slightly white alabastrum(tetraploid) 211.723
CNS0095606Slightly white alabastrum(tetraploid) 31.082
CNS0095607Whole white alabastrum(tetraploid) 114.565
CNS0095608Whole white alabastrum(tetraploid) 211.869
CNS0095609Whole white alabastrum(tetraploid) 34.719
CNS0095610Silvery flower (tetraploid) 16.645
CNS0095611Silvery flower (tetraploid) 27.290
CNS0095612Silvery flower (tetraploid) 33.494
CNS0095613Golden flower (tetraploid) 17.844
CNS0095614Golden flower (tetraploid) 28.634
CNS0095615Golden flower (tetraploid) 33.729
CRA001975CRR073297Stem 15.345
CRR073298Stem 24.748
CRR073299Stem 37.807
CRR073300Leaf 10.945
CRR073301Leaf 21.155
CRR073302Leaf 30.519
CRR073303Juvenile bud 10.733
CRR073304Juvenile bud 20.979
CRR073305Juvenile bud 31.416
CRR073306Third green 11.111
CRR073307Third green 21.257
CRR073308Third green 32.048
CRR073309Second white 11.047
CRR073310Second white 21.894
CRR073311Second white 30.538
CRR073312Silver flowering 14.120
CRR073313Silver flowering 24.386
CRR073314Silver flowering 34.650
CRR073315Gold flowering 110.196
CRR073316Gold flowering 220.021
CRR073317Gold flowering 38.078
CRR073318Tawny withering 19.515
CRR073319Tawny withering 211.638
CRR073320Tawny withering 36.118