Gene detail

Detail information of GWHGAAZE026821

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	CDP15899.1	1.7246E-120	unnamed protein product [Coffea canephora]
Swissprot	tr\|Q9M2K4\|BZP61_ARATH	6E-111	Basic leucine zipper 61
trEMBL	tr\|A0A068V5U8\|A0A068V5U8_COFCA	6E-121	Coffea canephora DH200=94 genomic scaffold, scaffold_112 {ECO:0000313\|EMBL:CDP15899.1}
TAIR10	AT3G58120.1	1E-78	Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	10562897	10565389	-
GWHAAZE00000008	mRNA	10562897	10565389	-
GWHAAZE00000008	exon	10562897	10563036	-
GWHAAZE00000008	exon	10563655	10563781	-
GWHAAZE00000008	exon	10563912	10564002	-
GWHAAZE00000008	exon	10564872	10565389	-
GWHAAZE00000008	CDS	10564872	10565389	-
GWHAAZE00000008	CDS	10563912	10564002	-
GWHAAZE00000008	CDS	10563655	10563781	-
GWHAAZE00000008	CDS	10562897	10563036	-

Transcript Sequence
>GWHTAAZE026855 ATGGCACAATTACCTCCCAAAGTCCCAAACATGCCACCACCAACCAACTGGCCAGACATATCCCACCACCAAAGAATCCCTTCCATGGACACCTTAACCCCACCACCAAACACCACCACTCAGACCCCCTCTTGGGTAGACGAATTCCTCGATTTCTCCTCCACCAAACGAGGGTCCCACCGGAGATCTGCCAGTGACTCCATCGCGTTCCTCGAGGTTCCGGGCGGGTCCAGGTCAGCCATGGAGTTTGACCGGTTTGACGAGGAGCAGTTTATGTCAATGTTCATTGTGGATGATGGAGCAGTGGGGCCCGGGGGGTCAACGCCATCGTCGCCGTCAGATCATAATAGCATGAGTGATCAGGATAATAGGCAAGTGGGGGAATGTGATCAGTTGTTAATGCAGCAGCAGTTGAAGAGTGAAGGTGGTGGTGAGGTGCAAAGCTCGTGCGGGTCTGATGGACAACTTACTCCCAATTCATCTGATGATAAGATCTTTGATCCCAAAAGGATTAAGAGAATACTGGCCAACAGACAATCGGCACAAAGATCACGGGTGAGGAAATTACAGTACATATCGGAGCTTGAACGGAGTGTTAACTCATTACAGACCGAGGTTTCAGTGTTGTCACCACGTGTCGCATTCCTGGACCACCAGCGTTTAGTTCTAAACGTGGATAATAGTGTTCTTAAGCAAAGGATAGCTGCACTCGCCCAAGATAAACTTTTCAAAGATGCTCATCAGGAAGCAATGAAGAGGGAAATAGAGAGGCTGAGGCAATTGTACTACCAACAAAACCTCAAGAAAATGGACAACAATACTACACCCTCTGATGTCAATTGTTCTACACAGCAAGAACAAATTATGACCAACTGA

Network for GWHGAAZE026821

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00170.22	bZIP_1	169	213	2.10E-09

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	30.878
	SRR3591706	second leaf	14.355
	SRR3591707	mature leaf	4.635
	SRR3591708	Shoot apex	11.666
	SRR3591709	Stem	1.556
	SRR3591710	White floral bud	2.465
	SRR3591711	White flower	0.006
	SRR3591712	Green floral bud	2.517
	SRR3591713	Yellow flower	0.178
SRP173429	SRR8316895	Juvenile bud stage	8.385
	SRR8316896	Juvenile bud stage	7.257
	SRR8316897	Juvenile bud stage	8.734
	SRR8316894	Third green stage	1.861
	SRR8316900	Third green stage	3.034
	SRR8316901	Third green stage	6.347
	SRR8316898	Complete white stage	1.954
	SRR8316899	Complete white stage	9.725
	SRR8316903	Complete white stage	1.781
	SRR8316902	Silver flowering stage	0.725
	SRR8316904	Silver flowering stage	0.800
	SRR8316905	Silver flowering stage	0.558
	SRR8316906	Gold flowering stage	0.446
	SRR8316907	Gold flowering stage	0.354
	SRR8316908	Gold flowering stage	0.264
SRP132670	SRR6706286	Control	5.790
	SRR6706287	Light intensity 50%	10.230
	SRR6706288	Light intensity 20%	12.298
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	5.741
	CNS0095593	Slightly white alabastrum(diploid) 2	9.025
	CNS0095594	Slightly white alabastrum(diploid) 3	8.174
	CNS0095595	Whole white alabastrum(diploid) 2	4.841
	CNS0095596	Whole white alabastrum(diploid) 3	6.889
	CNS0095597	Whole white alabastrum(diploid) 4	6.806
	CNS0095598	Silvery flower (diploied) 1	0.432
	CNS0095599	Silvery flower (diploied) 2	0.113
	CNS0095600	Silvery flower (diploied) 3	0.761
	CNS0095601	Golden flower (diploid) 1	0.276
	CNS0095602	Golden flower (diploid) 2	0.195
	CNS0095603	Golden flower (diploid) 3	0.316
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.729
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.564
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.969
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.533
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.824
	CNS0095609	Whole white alabastrum(tetraploid) 3	3.562
	CNS0095610	Silvery flower (tetraploid) 1	0.830
	CNS0095611	Silvery flower (tetraploid) 2	1.437
	CNS0095612	Silvery flower (tetraploid) 3	0.435
	CNS0095613	Golden flower (tetraploid) 1	0.208
	CNS0095614	Golden flower (tetraploid) 2	0.058
	CNS0095615	Golden flower (tetraploid) 3	0.078
CRA001975	CRR073297	Stem 1	4.472
	CRR073298	Stem 2	3.323
	CRR073299	Stem 3	3.238
	CRR073300	Leaf 1	8.113
	CRR073301	Leaf 2	9.059
	CRR073302	Leaf 3	7.219
	CRR073303	Juvenile bud 1	8.106
	CRR073304	Juvenile bud 2	6.047
	CRR073305	Juvenile bud 3	13.281
	CRR073306	Third green 1	2.073
	CRR073307	Third green 2	5.218
	CRR073308	Third green 3	1.617
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.103
	CRR073311	Second white 3	0.063
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	4.767
	CRR073316	Gold flowering 2	4.814
	CRR073317	Gold flowering 3	3.533
	CRR073318	Tawny withering 1	0.147
	CRR073319	Tawny withering 2	0.052
	CRR073320	Tawny withering 3	0.164