Detail information of GWHGAAZE026861


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002273772.10PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Vitis vinifera]
COGYP_003324408.12E-64glycoside hydrolase family protein
Swissprottr|Q7Y223|MAN2_ARATH0Mannan endo-1,4-beta-mannosidase 2 (Precursor)
trEMBLtr|E0CTE2|E0CTE2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI21857.3}
TAIR10AT2G20680.16E-178Glycosyl hydrolase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1118331811188139+
GWHAAZE00000008mRNA1118331811188139+
GWHAAZE00000008exon1118331811183674+
GWHAAZE00000008exon1118508711185284+
GWHAAZE00000008exon1118597011186092+
GWHAAZE00000008exon1118684711187058+
GWHAAZE00000008exon1118759411188139+
GWHAAZE00000008CDS1118331811183674+
GWHAAZE00000008CDS1118508711185284+
GWHAAZE00000008CDS1118597011186092+
GWHAAZE00000008CDS1118684711187058+
GWHAAZE00000008CDS1118759411188002+
GWHAAZE00000008three_prime_UTR1118800311188139+
Transcript Sequence

Network for GWHGAAZE026861

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00150.19Cellulase693594.00E-14
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K19355MAN Metabolic pathways map01100
Fructose and mannose metabolismmap00051

Gene Ontology

GO term OntologyName
GO:0005975biological_processcarbohydrate metabolic process
GO:0004553molecular_functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf37.838
SRR3591706second leaf23.545
SRR3591707mature leaf13.795
SRR3591708Shoot apex25.422
SRR3591709Stem27.789
SRR3591710White floral bud49.175
SRR3591711White flower28.234
SRR3591712Green floral bud77.340
SRR3591713Yellow flower17.994
SRP173429 SRR8316895Juvenile bud stage 17.564
SRR8316896Juvenile bud stage 28.029
SRR8316897Juvenile bud stage 12.593
SRR8316894Third green stage 12.579
SRR8316900Third green stage 32.448
SRR8316901Third green stage 35.551
SRR8316898Complete white stage 12.687
SRR8316899Complete white stage 41.919
SRR8316903Complete white stage 16.385
SRR8316902Silver flowering stage7.399
SRR8316904Silver flowering stage8.365
SRR8316905Silver flowering stage4.985
SRR8316906Gold flowering stage 16.769
SRR8316907Gold flowering stage 14.954
SRR8316908Gold flowering stage 19.187
SRP132670SRR6706286Control13.845
SRR6706287Light intensity 50%18.182
SRR6706288Light intensity 20%19.325
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.696
CNS0095593Slightly white alabastrum(diploid) 225.964
CNS0095594Slightly white alabastrum(diploid) 329.461
CNS0095595Whole white alabastrum(diploid) 222.994
CNS0095596Whole white alabastrum(diploid) 326.354
CNS0095597Whole white alabastrum(diploid) 418.955
CNS0095598Silvery flower (diploied) 114.822
CNS0095599Silvery flower (diploied) 210.176
CNS0095600Silvery flower (diploied) 313.383
CNS0095601Golden flower (diploid) 18.880
CNS0095602Golden flower (diploid) 213.600
CNS0095603Golden flower (diploid) 313.539
CNS0095604Slightly white alabastrum(tetraploid) 138.895
CNS0095605Slightly white alabastrum(tetraploid) 236.080
CNS0095606Slightly white alabastrum(tetraploid) 337.316
CNS0095607Whole white alabastrum(tetraploid) 127.802
CNS0095608Whole white alabastrum(tetraploid) 225.260
CNS0095609Whole white alabastrum(tetraploid) 330.822
CNS0095610Silvery flower (tetraploid) 117.381
CNS0095611Silvery flower (tetraploid) 211.700
CNS0095612Silvery flower (tetraploid) 313.993
CNS0095613Golden flower (tetraploid) 18.348
CNS0095614Golden flower (tetraploid) 213.688
CNS0095615Golden flower (tetraploid) 37.846
CRA001975CRR073297Stem 121.753
CRR073298Stem 215.835
CRR073299Stem 320.119
CRR073300Leaf 122.579
CRR073301Leaf 217.523
CRR073302Leaf 319.319
CRR073303Juvenile bud 121.363
CRR073304Juvenile bud 225.131
CRR073305Juvenile bud 321.006
CRR073306Third green 17.063
CRR073307Third green 27.297
CRR073308Third green 38.081
CRR073309Second white 18.178
CRR073310Second white 26.309
CRR073311Second white 35.366
CRR073312Silver flowering 14.890
CRR073313Silver flowering 22.822
CRR073314Silver flowering 32.337
CRR073315Gold flowering 110.129
CRR073316Gold flowering 212.110
CRR073317Gold flowering 36.585
CRR073318Tawny withering 129.628
CRR073319Tawny withering 228.879
CRR073320Tawny withering 322.660