Gene detail

Detail information of GWHGAAZE026894

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	NP_001241143.1	5.1601E-141	uncharacterized protein LOC100815782 [Glycine max]
Swissprot	tr\|Q8GZA8\|ULT1_ARATH	1E-127	Protein ULTRAPETALA 1
trEMBL	tr\|C6TAD2\|C6TAD2_SOYBN	2E-141	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G45180.1}
TAIR10	AT4G28190.1	4E-101	Developmental regulator, ULTRAPETALA

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	11612356	11615666	+
GWHAAZE00000008	mRNA	11612356	11615666	+
GWHAAZE00000008	exon	11612356	11612593	+
GWHAAZE00000008	exon	11614172	11614496	+
GWHAAZE00000008	exon	11615199	11615666	+
GWHAAZE00000008	CDS	11612356	11612593	+
GWHAAZE00000008	CDS	11614172	11614496	+
GWHAAZE00000008	CDS	11615199	11615373	+
GWHAAZE00000008	three_prime_UTR	11615374	11615666	+

Transcript Sequence
>GWHTAAZE026928 AGAGAGAAGGAGATGGAGATGGAGATGGAGATGGAGATGGAGAGAGAGAGCGGCGCTTTGCTGTTGTTCAGTGAAGAGGAGGTGAGAGAGATAAGTGGGGTGAAGATAATCGGTGATCACGTGGAGGTCACGTGCGGCTGTACTAGCCATCGTTACGGCGACGCTGTGGGTACCCTTAGGGTTTTCCCAAGTGGCGACCTCGAAATCAGCTGTGAATGTACCCCTGGTTGTCAGGAAGACAAATTGACCCCTGCCGCATTTGAGAAGCACTCTGGACGAGAAACTGCGAGGAAATGGAAGAATAATATTTGGGTAATATCCAATGGGGAGAAGGTTCCTTTGTCAAAGACAGTGCTTCTTAAGTACTACAACCAAGCATCCAAAACTGCTAACGGGTCCACTAGATCCCAAAATGGGCGTGTTTGTCATCGTGATGAGTTTGTTCGCTGCACACAATGTAATAAGCAGCGCAGGTTTCGTCTTCGTACGAAGGAGGAATGTCGGGCCCACCATGATGCTCTTGGGGATGTGAATTGGAAGTGTTCTGATATGCCTTGCGAAAAAGTAACATGTGAAGATGATGAAGAACGAGCAAGCCGAAGGGTGTACAGAGGGTGTGCGCGTTCTCCAACATGCAGGGGCTGTACTTCTTGCGTGTGTTTTGGGTGCGAAATTTGTCGTTTTTCAGAATGCAGCTGCCAGACTTGCATGGACTTCACCATAAATAATGGTGCCTAGTGTTGATCCATTTGAGTTTCTCTGAAAGGAACAAACCCCATTTTTCTGTTTCCCCAAAACTACTATTTACTGATTAGGGTTTATCTCCCCATTGCTAATTCATTCAGCCCACATTTACAGAAAGCTTTAAGCCCTTCCAGTGATGTCAATTTAATTTTAGGACCTTTCTAAGTTACAATATCCAGAGTCTTGGTGACTGCTTCAGAAGCTTGCAAAAGTCAGTTATTTAATTATTCTCTTCAGTAAAAATGTCGGTGGTCATGTCACATGAAGGAGATATGATCCTTTTTCCT

Network for GWHGAAZE026894

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01342.22	SAND	68	105	3.80E-05

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	ULT

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	26.343
	SRR3591706	second leaf	10.487
	SRR3591707	mature leaf	5.185
	SRR3591708	Shoot apex	15.367
	SRR3591709	Stem	50.707
	SRR3591710	White floral bud	26.557
	SRR3591711	White flower	15.034
	SRR3591712	Green floral bud	24.286
	SRR3591713	Yellow flower	9.520
SRP173429	SRR8316895	Juvenile bud stage	20.888
	SRR8316896	Juvenile bud stage	34.960
	SRR8316897	Juvenile bud stage	11.904
	SRR8316894	Third green stage	9.445
	SRR8316900	Third green stage	32.294
	SRR8316901	Third green stage	32.307
	SRR8316898	Complete white stage	18.668
	SRR8316899	Complete white stage	44.655
	SRR8316903	Complete white stage	18.899
	SRR8316902	Silver flowering stage	19.457
	SRR8316904	Silver flowering stage	13.870
	SRR8316905	Silver flowering stage	10.397
	SRR8316906	Gold flowering stage	33.808
	SRR8316907	Gold flowering stage	32.522
	SRR8316908	Gold flowering stage	31.688
SRP132670	SRR6706286	Control	30.250
	SRR6706287	Light intensity 50%	30.211
	SRR6706288	Light intensity 20%	30.879
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	53.149
	CNS0095593	Slightly white alabastrum(diploid) 2	48.528
	CNS0095594	Slightly white alabastrum(diploid) 3	63.198
	CNS0095595	Whole white alabastrum(diploid) 2	48.567
	CNS0095596	Whole white alabastrum(diploid) 3	56.859
	CNS0095597	Whole white alabastrum(diploid) 4	52.240
	CNS0095598	Silvery flower (diploied) 1	18.439
	CNS0095599	Silvery flower (diploied) 2	23.889
	CNS0095600	Silvery flower (diploied) 3	30.082
	CNS0095601	Golden flower (diploid) 1	18.034
	CNS0095602	Golden flower (diploid) 2	21.055
	CNS0095603	Golden flower (diploid) 3	23.880
	CNS0095604	Slightly white alabastrum(tetraploid) 1	40.935
	CNS0095605	Slightly white alabastrum(tetraploid) 2	48.321
	CNS0095606	Slightly white alabastrum(tetraploid) 3	18.628
	CNS0095607	Whole white alabastrum(tetraploid) 1	41.196
	CNS0095608	Whole white alabastrum(tetraploid) 2	35.500
	CNS0095609	Whole white alabastrum(tetraploid) 3	27.007
	CNS0095610	Silvery flower (tetraploid) 1	20.440
	CNS0095611	Silvery flower (tetraploid) 2	25.379
	CNS0095612	Silvery flower (tetraploid) 3	27.309
	CNS0095613	Golden flower (tetraploid) 1	18.516
	CNS0095614	Golden flower (tetraploid) 2	17.419
	CNS0095615	Golden flower (tetraploid) 3	22.500
CRA001975	CRR073297	Stem 1	45.209
	CRR073298	Stem 2	35.084
	CRR073299	Stem 3	41.081
	CRR073300	Leaf 1	46.244
	CRR073301	Leaf 2	48.029
	CRR073302	Leaf 3	50.491
	CRR073303	Juvenile bud 1	62.693
	CRR073304	Juvenile bud 2	70.910
	CRR073305	Juvenile bud 3	58.851
	CRR073306	Third green 1	52.067
	CRR073307	Third green 2	67.581
	CRR073308	Third green 3	49.123
	CRR073309	Second white 1	35.426
	CRR073310	Second white 2	26.676
	CRR073311	Second white 3	30.383
	CRR073312	Silver flowering 1	24.840
	CRR073313	Silver flowering 2	19.438
	CRR073314	Silver flowering 3	19.766
	CRR073315	Gold flowering 1	19.135
	CRR073316	Gold flowering 2	17.496
	CRR073317	Gold flowering 3	14.473
	CRR073318	Tawny withering 1	68.180
	CRR073319	Tawny withering 2	58.368
	CRR073320	Tawny withering 3	71.288