Detail information of GWHGAAZE026915


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO47748.16.90273E-80hypothetical protein CISIN_1g043655mg [Citrus sinensis]
Swissprottr|Q9ZR09|FDL25_ARATH6E-45Putative F-box/FBD/LRR-repeat protein At4g03220
trEMBLtr|A0A067DY65|A0A067DY65_CITSI3E-80Uncharacterized protein {ECO:0000313|EMBL:KDO47748.1}
TAIR10AT4G03220.16E-40Protein with RNI-like/FBD-like domains

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1198179511982934-
GWHAAZE00000008mRNA1198179511982934-
GWHAAZE00000008exon1198179511982934-
GWHAAZE00000008CDS1198179511982934-
Transcript Sequence

Network for GWHGAAZE026915

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00646.34F-box26618.70E-05
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin FamilyF-box

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.741
SRR3591706second leaf5.764
SRR3591707mature leaf4.638
SRR3591708Shoot apex8.826
SRR3591709Stem8.376
SRR3591710White floral bud7.651
SRR3591711White flower11.702
SRR3591712Green floral bud9.183
SRR3591713Yellow flower10.640
SRP173429 SRR8316895Juvenile bud stage 4.801
SRR8316896Juvenile bud stage 6.692
SRR8316897Juvenile bud stage 2.542
SRR8316894Third green stage 3.447
SRR8316900Third green stage 6.921
SRR8316901Third green stage 5.569
SRR8316898Complete white stage 1.555
SRR8316899Complete white stage 6.002
SRR8316903Complete white stage 2.906
SRR8316902Silver flowering stage2.661
SRR8316904Silver flowering stage3.574
SRR8316905Silver flowering stage1.134
SRR8316906Gold flowering stage 4.034
SRR8316907Gold flowering stage 2.890
SRR8316908Gold flowering stage 3.555
SRP132670SRR6706286Control0.575
SRR6706287Light intensity 50%0.923
SRR6706288Light intensity 20%1.239
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.830
CNS0095593Slightly white alabastrum(diploid) 22.651
CNS0095594Slightly white alabastrum(diploid) 34.479
CNS0095595Whole white alabastrum(diploid) 22.464
CNS0095596Whole white alabastrum(diploid) 32.508
CNS0095597Whole white alabastrum(diploid) 43.368
CNS0095598Silvery flower (diploied) 16.340
CNS0095599Silvery flower (diploied) 24.394
CNS0095600Silvery flower (diploied) 34.463
CNS0095601Golden flower (diploid) 11.715
CNS0095602Golden flower (diploid) 24.677
CNS0095603Golden flower (diploid) 35.222
CNS0095604Slightly white alabastrum(tetraploid) 14.084
CNS0095605Slightly white alabastrum(tetraploid) 23.488
CNS0095606Slightly white alabastrum(tetraploid) 35.413
CNS0095607Whole white alabastrum(tetraploid) 13.432
CNS0095608Whole white alabastrum(tetraploid) 22.086
CNS0095609Whole white alabastrum(tetraploid) 34.670
CNS0095610Silvery flower (tetraploid) 12.595
CNS0095611Silvery flower (tetraploid) 23.595
CNS0095612Silvery flower (tetraploid) 31.568
CNS0095613Golden flower (tetraploid) 11.164
CNS0095614Golden flower (tetraploid) 22.930
CNS0095615Golden flower (tetraploid) 31.682
CRA001975CRR073297Stem 13.826
CRR073298Stem 23.436
CRR073299Stem 32.574
CRR073300Leaf 13.286
CRR073301Leaf 22.932
CRR073302Leaf 31.531
CRR073303Juvenile bud 11.712
CRR073304Juvenile bud 21.452
CRR073305Juvenile bud 31.523
CRR073306Third green 10.971
CRR073307Third green 20.885
CRR073308Third green 30.894
CRR073309Second white 10.610
CRR073310Second white 21.112
CRR073311Second white 30.517
CRR073312Silver flowering 10.838
CRR073313Silver flowering 20.268
CRR073314Silver flowering 30.202
CRR073315Gold flowering 10.413
CRR073316Gold flowering 20.424
CRR073317Gold flowering 30.184
CRR073318Tawny withering 11.135
CRR073319Tawny withering 21.684
CRR073320Tawny withering 32.241