Detail information of GWHGAAZE026929


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP25866.17.2519E-141hypothetical protein JCGZ_22896 [Jatropha curcas]
Swissprottr|Q9LSX7|PEX22_ARATH1E-116Peroxisome biogenesis protein 22
trEMBLtr|A0A067JPH2|A0A067JPH2_JATCU3E-141Uncharacterized protein {ECO:0000313|EMBL:KDP25866.1}
TAIR10AT3G21865.18E-94peroxin 22

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1225823212261896+
GWHAAZE00000008mRNA1225823212261896+
GWHAAZE00000008exon1225823212258474+
GWHAAZE00000008exon1225877012258817+
GWHAAZE00000008exon1225967812259734+
GWHAAZE00000008exon1225981912259920+
GWHAAZE00000008exon1226055012260615+
GWHAAZE00000008exon1226133712261438+
GWHAAZE00000008exon1226178012261896+
GWHAAZE00000008CDS1225823212258474+
GWHAAZE00000008CDS1225877012258817+
GWHAAZE00000008CDS1225967812259734+
GWHAAZE00000008CDS1225981912259920+
GWHAAZE00000008CDS1226055012260615+
GWHAAZE00000008CDS1226133712261438+
GWHAAZE00000008CDS1226178012261896+
Transcript Sequence

Network for GWHGAAZE026929

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0242


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf122.617
SRR3591706second leaf63.827
SRR3591707mature leaf55.460
SRR3591708Shoot apex81.266
SRR3591709Stem108.138
SRR3591710White floral bud104.018
SRR3591711White flower133.123
SRR3591712Green floral bud101.270
SRR3591713Yellow flower122.428
SRP173429 SRR8316895Juvenile bud stage 57.847
SRR8316896Juvenile bud stage 75.117
SRR8316897Juvenile bud stage 42.101
SRR8316894Third green stage 32.604
SRR8316900Third green stage 103.044
SRR8316901Third green stage 96.470
SRR8316898Complete white stage 53.808
SRR8316899Complete white stage 150.266
SRR8316903Complete white stage 92.175
SRR8316902Silver flowering stage68.155
SRR8316904Silver flowering stage78.745
SRR8316905Silver flowering stage39.546
SRR8316906Gold flowering stage 133.077
SRR8316907Gold flowering stage 133.778
SRR8316908Gold flowering stage 142.490
SRP132670SRR6706286Control97.245
SRR6706287Light intensity 50%96.521
SRR6706288Light intensity 20%102.465
CNP0000432CNS0095592Slightly white alabastrum(diploid) 188.301
CNS0095593Slightly white alabastrum(diploid) 292.253
CNS0095594Slightly white alabastrum(diploid) 386.950
CNS0095595Whole white alabastrum(diploid) 277.548
CNS0095596Whole white alabastrum(diploid) 374.006
CNS0095597Whole white alabastrum(diploid) 466.301
CNS0095598Silvery flower (diploied) 176.184
CNS0095599Silvery flower (diploied) 275.588
CNS0095600Silvery flower (diploied) 3129.370
CNS0095601Golden flower (diploid) 171.643
CNS0095602Golden flower (diploid) 2114.000
CNS0095603Golden flower (diploid) 3110.931
CNS0095604Slightly white alabastrum(tetraploid) 194.384
CNS0095605Slightly white alabastrum(tetraploid) 280.951
CNS0095606Slightly white alabastrum(tetraploid) 3118.789
CNS0095607Whole white alabastrum(tetraploid) 168.445
CNS0095608Whole white alabastrum(tetraploid) 262.421
CNS0095609Whole white alabastrum(tetraploid) 395.787
CNS0095610Silvery flower (tetraploid) 1121.001
CNS0095611Silvery flower (tetraploid) 2106.194
CNS0095612Silvery flower (tetraploid) 399.995
CNS0095613Golden flower (tetraploid) 189.670
CNS0095614Golden flower (tetraploid) 2104.577
CNS0095615Golden flower (tetraploid) 3100.878
CRA001975CRR073297Stem 193.567
CRR073298Stem 278.242
CRR073299Stem 385.944
CRR073300Leaf 189.956
CRR073301Leaf 295.851
CRR073302Leaf 399.200
CRR073303Juvenile bud 1108.819
CRR073304Juvenile bud 2113.366
CRR073305Juvenile bud 3115.754
CRR073306Third green 191.014
CRR073307Third green 288.774
CRR073308Third green 383.691
CRR073309Second white 185.088
CRR073310Second white 277.426
CRR073311Second white 370.917
CRR073312Silver flowering 175.729
CRR073313Silver flowering 281.078
CRR073314Silver flowering 369.122
CRR073315Gold flowering 146.188
CRR073316Gold flowering 261.638
CRR073317Gold flowering 349.640
CRR073318Tawny withering 184.884
CRR073319Tawny withering 281.203
CRR073320Tawny withering 397.564