Detail information of GWHGAAZE026934


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002280274.10PREDICTED: peroxidase 3 [Vitis vinifera]
Swissprottr|O23044|PER3_ARATH2E-169Peroxidase 3 (Precursor)
trEMBLtr|F6HIK4|F6HIK4_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB52050.1}
TAIR10AT1G05260.12E-135Peroxidase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1233650912338524-
GWHAAZE00000008mRNA1233650912338524-
GWHAAZE00000008exon1233650912336927-
GWHAAZE00000008exon1233771012337872-
GWHAAZE00000008exon1233798312338180-
GWHAAZE00000008exon1233831512338524-
GWHAAZE00000008CDS1233831512338524-
GWHAAZE00000008CDS1233798312338180-
GWHAAZE00000008CDS1233771012337872-
GWHAAZE00000008CDS1233650912336927-
Transcript Sequence

Network for GWHGAAZE026934

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00141.24peroxidase452872.70E-74
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00430E1.11.1.7 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0006979biological_processresponse to oxidative stress
GO:0055114biological_processoxidation-reduction process
GO:0042744biological_processhydrogen peroxide catabolic process
GO:0004601molecular_functionperoxidase activity
GO:0020037molecular_functionheme binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf154.962
SRR3591706second leaf84.399
SRR3591707mature leaf52.192
SRR3591708Shoot apex61.606
SRR3591709Stem177.961
SRR3591710White floral bud20.092
SRR3591711White flower74.985
SRR3591712Green floral bud14.812
SRR3591713Yellow flower5.362
SRP173429 SRR8316895Juvenile bud stage 6.294
SRR8316896Juvenile bud stage 7.233
SRR8316897Juvenile bud stage 3.554
SRR8316894Third green stage 3.916
SRR8316900Third green stage 3.380
SRR8316901Third green stage 4.168
SRR8316898Complete white stage 8.374
SRR8316899Complete white stage 18.175
SRR8316903Complete white stage 7.351
SRR8316902Silver flowering stage9.283
SRR8316904Silver flowering stage21.179
SRR8316905Silver flowering stage12.033
SRR8316906Gold flowering stage 44.594
SRR8316907Gold flowering stage 28.595
SRR8316908Gold flowering stage 47.267
SRP132670SRR6706286Control2.736
SRR6706287Light intensity 50%2.921
SRR6706288Light intensity 20%2.834
CNP0000432CNS0095592Slightly white alabastrum(diploid) 119.077
CNS0095593Slightly white alabastrum(diploid) 219.390
CNS0095594Slightly white alabastrum(diploid) 310.736
CNS0095595Whole white alabastrum(diploid) 210.631
CNS0095596Whole white alabastrum(diploid) 33.076
CNS0095597Whole white alabastrum(diploid) 411.712
CNS0095598Silvery flower (diploied) 128.263
CNS0095599Silvery flower (diploied) 229.958
CNS0095600Silvery flower (diploied) 322.123
CNS0095601Golden flower (diploid) 110.461
CNS0095602Golden flower (diploid) 210.412
CNS0095603Golden flower (diploid) 38.229
CNS0095604Slightly white alabastrum(tetraploid) 110.813
CNS0095605Slightly white alabastrum(tetraploid) 212.048
CNS0095606Slightly white alabastrum(tetraploid) 315.346
CNS0095607Whole white alabastrum(tetraploid) 116.530
CNS0095608Whole white alabastrum(tetraploid) 26.817
CNS0095609Whole white alabastrum(tetraploid) 31.440
CNS0095610Silvery flower (tetraploid) 114.740
CNS0095611Silvery flower (tetraploid) 27.380
CNS0095612Silvery flower (tetraploid) 311.539
CNS0095613Golden flower (tetraploid) 19.271
CNS0095614Golden flower (tetraploid) 210.414
CNS0095615Golden flower (tetraploid) 312.953
CRA001975CRR073297Stem 111.384
CRR073298Stem 28.618
CRR073299Stem 312.604
CRR073300Leaf 14.097
CRR073301Leaf 24.029
CRR073302Leaf 33.440
CRR073303Juvenile bud 17.187
CRR073304Juvenile bud 22.182
CRR073305Juvenile bud 33.810
CRR073306Third green 14.337
CRR073307Third green 25.555
CRR073308Third green 35.165
CRR073309Second white 16.506
CRR073310Second white 25.869
CRR073311Second white 31.859
CRR073312Silver flowering 10.196
CRR073313Silver flowering 20.591
CRR073314Silver flowering 30.152
CRR073315Gold flowering 121.968
CRR073316Gold flowering 226.002
CRR073317Gold flowering 319.121
CRR073318Tawny withering 1101.999
CRR073319Tawny withering 2117.333
CRR073320Tawny withering 3139.986