Detail information of GWHGAAZE026966


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007215952.11.4983E-143hypothetical protein PRUPE_ppa011295mg [Prunus persica]
Swissprottr|Q710E8|ORC1A_ARATH0.00000001Origin of replication complex subunit 1A {ECO:0000303|PubMed:16179646}
trEMBLtr|M5WV88|M5WV88_PRUPE6E-144Uncharacterized protein {ECO:0000313|EMBL:EMJ17151.1}
TAIR10AT4G22140.24E-100PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1289434912900529-
GWHAAZE00000008mRNA1289434912900529-
GWHAAZE00000008exon1289434912894404-
GWHAAZE00000008exon1289476012894795-
GWHAAZE00000008exon1289504912895226-
GWHAAZE00000008exon1289956912899637-
GWHAAZE00000008exon1289973912900081-
GWHAAZE00000008exon1290045712900529-
GWHAAZE00000008CDS1290045712900529-
GWHAAZE00000008CDS1289973912900081-
GWHAAZE00000008CDS1289956912899637-
GWHAAZE00000008CDS1289504912895226-
GWHAAZE00000008CDS1289477812894795-
GWHAAZE00000008three_prime_UTR1289476012894777-
GWHAAZE00000008three_prime_UTR1289434912894404-
Transcript Sequence

Network for GWHGAAZE026966

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01426.19BAH231355.60E-25
PF00628.30PHD1401884.10E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyPHD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003682molecular_functionchromatin binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf39.837
SRR3591706second leaf29.218
SRR3591707mature leaf26.491
SRR3591708Shoot apex57.468
SRR3591709Stem46.446
SRR3591710White floral bud30.896
SRR3591711White flower44.117
SRR3591712Green floral bud29.517
SRR3591713Yellow flower46.782
SRP173429 SRR8316895Juvenile bud stage 29.973
SRR8316896Juvenile bud stage 40.104
SRR8316897Juvenile bud stage 19.581
SRR8316894Third green stage 14.102
SRR8316900Third green stage 35.165
SRR8316901Third green stage 34.030
SRR8316898Complete white stage 11.589
SRR8316899Complete white stage 44.498
SRR8316903Complete white stage 21.438
SRR8316902Silver flowering stage14.349
SRR8316904Silver flowering stage16.882
SRR8316905Silver flowering stage8.238
SRR8316906Gold flowering stage 31.620
SRR8316907Gold flowering stage 31.233
SRR8316908Gold flowering stage 26.995
SRP132670SRR6706286Control37.945
SRR6706287Light intensity 50%38.186
SRR6706288Light intensity 20%40.506
CNP0000432CNS0095592Slightly white alabastrum(diploid) 142.274
CNS0095593Slightly white alabastrum(diploid) 240.336
CNS0095594Slightly white alabastrum(diploid) 346.427
CNS0095595Whole white alabastrum(diploid) 235.700
CNS0095596Whole white alabastrum(diploid) 334.041
CNS0095597Whole white alabastrum(diploid) 436.801
CNS0095598Silvery flower (diploied) 138.162
CNS0095599Silvery flower (diploied) 233.418
CNS0095600Silvery flower (diploied) 333.225
CNS0095601Golden flower (diploid) 144.552
CNS0095602Golden flower (diploid) 242.659
CNS0095603Golden flower (diploid) 340.749
CNS0095604Slightly white alabastrum(tetraploid) 152.069
CNS0095605Slightly white alabastrum(tetraploid) 261.028
CNS0095606Slightly white alabastrum(tetraploid) 348.874
CNS0095607Whole white alabastrum(tetraploid) 152.335
CNS0095608Whole white alabastrum(tetraploid) 249.805
CNS0095609Whole white alabastrum(tetraploid) 337.112
CNS0095610Silvery flower (tetraploid) 140.327
CNS0095611Silvery flower (tetraploid) 244.328
CNS0095612Silvery flower (tetraploid) 335.967
CNS0095613Golden flower (tetraploid) 128.738
CNS0095614Golden flower (tetraploid) 235.017
CNS0095615Golden flower (tetraploid) 325.133
CRA001975CRR073297Stem 143.868
CRR073298Stem 245.884
CRR073299Stem 346.893
CRR073300Leaf 142.363
CRR073301Leaf 247.748
CRR073302Leaf 340.193
CRR073303Juvenile bud 136.103
CRR073304Juvenile bud 227.903
CRR073305Juvenile bud 340.301
CRR073306Third green 117.546
CRR073307Third green 223.596
CRR073308Third green 318.175
CRR073309Second white 124.433
CRR073310Second white 229.667
CRR073311Second white 321.462
CRR073312Silver flowering 122.311
CRR073313Silver flowering 218.123
CRR073314Silver flowering 316.614
CRR073315Gold flowering 120.327
CRR073316Gold flowering 221.008
CRR073317Gold flowering 323.754
CRR073318Tawny withering 140.139
CRR073319Tawny withering 236.195
CRR073320Tawny withering 338.048