Detail information of GWHGAAZE026974


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAEM62884.10ACC oxidase 5 [Actinidia deliciosa]
COGYP_003514298.12E-302OG-Fe(II) oxygenase
Swissprottr|Q08507|ACCO3_PETHY01-aminocyclopropane-1-carboxylate oxidase 3
trEMBLtr|G3DSC3|G3DSC3_ACTDE0ACC oxidase 5 {ECO:0000313|EMBL:AEM62884.1}
TAIR10AT1G05010.11E-130ethylene-forming enzyme

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1302222713023938+
GWHAAZE00000008mRNA1302222713023938+
GWHAAZE00000008exon1302222713022331+
GWHAAZE00000008exon1302265213022875+
GWHAAZE00000008exon1302322713023560+
GWHAAZE00000008exon1302366913023938+
GWHAAZE00000008CDS1302222713022331+
GWHAAZE00000008CDS1302265213022875+
GWHAAZE00000008CDS1302322713023560+
GWHAAZE00000008CDS1302366913023938+
Transcript Sequence

Network for GWHGAAZE026974

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14226.7DIOX_N5664.60E-13
PF03171.212OG-FeII_Oxy1582529.60E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K05933E1.14.17.4 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Cysteine and methionine metabolismmap00270

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE026974.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 305101520253035404550Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.784
SRR3591706second leaf1.508
SRR3591707mature leaf0.887
SRR3591708Shoot apex1.346
SRR3591709Stem6.159
SRR3591710White floral bud5.471
SRR3591711White flower36.123
SRR3591712Green floral bud2.520
SRR3591713Yellow flower14.738
SRP173429 SRR8316895Juvenile bud stage 0.440
SRR8316896Juvenile bud stage 0.623
SRR8316897Juvenile bud stage 0.362
SRR8316894Third green stage 0.000
SRR8316900Third green stage 0.248
SRR8316901Third green stage 0.600
SRR8316898Complete white stage 1.102
SRR8316899Complete white stage 0.345
SRR8316903Complete white stage 1.577
SRR8316902Silver flowering stage1.395
SRR8316904Silver flowering stage1.255
SRR8316905Silver flowering stage0.482
SRR8316906Gold flowering stage 6.374
SRR8316907Gold flowering stage 3.160
SRR8316908Gold flowering stage 12.398
SRP132670SRR6706286Control0.093
SRR6706287Light intensity 50%0.132
SRR6706288Light intensity 20%0.028
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.402
CNS0095593Slightly white alabastrum(diploid) 20.000
CNS0095594Slightly white alabastrum(diploid) 30.139
CNS0095595Whole white alabastrum(diploid) 20.164
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.067
CNS0095598Silvery flower (diploied) 16.169
CNS0095599Silvery flower (diploied) 22.801
CNS0095600Silvery flower (diploied) 35.147
CNS0095601Golden flower (diploid) 12.972
CNS0095602Golden flower (diploid) 26.039
CNS0095603Golden flower (diploid) 37.343
CNS0095604Slightly white alabastrum(tetraploid) 10.033
CNS0095605Slightly white alabastrum(tetraploid) 20.037
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.180
CNS0095610Silvery flower (tetraploid) 111.767
CNS0095611Silvery flower (tetraploid) 214.458
CNS0095612Silvery flower (tetraploid) 35.353
CNS0095613Golden flower (tetraploid) 128.108
CNS0095614Golden flower (tetraploid) 243.721
CNS0095615Golden flower (tetraploid) 33.623
CRA001975CRR073297Stem 10.070
CRR073298Stem 20.083
CRR073299Stem 30.179
CRR073300Leaf 10.000
CRR073301Leaf 20.000
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.046
CRR073304Juvenile bud 20.094
CRR073305Juvenile bud 30.192
CRR073306Third green 10.220
CRR073307Third green 20.297
CRR073308Third green 30.082
CRR073309Second white 10.494
CRR073310Second white 20.740
CRR073311Second white 30.349
CRR073312Silver flowering 10.686
CRR073313Silver flowering 20.286
CRR073314Silver flowering 30.845
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.904
CRR073317Gold flowering 30.252
CRR073318Tawny withering 115.474
CRR073319Tawny withering 225.350
CRR073320Tawny withering 311.339