Detail information of GWHGAAZE026990


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002321169.12.42066E-56hypothetical protein POPTR_0014s16080g [Populus trichocarpa]
trEMBLtr|B9IAP2|B9IAP2_POPTR9E-57Uncharacterized protein {ECO:0000313|EMBL:EEE99484.1}
TAIR10AT2G04790.23E-35Without detailed annotation

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1327837613280142+
GWHAAZE00000008mRNA1327837613280142+
GWHAAZE00000008exon1327837613278666+
GWHAAZE00000008exon1327895113279035+
GWHAAZE00000008exon1327985913279936+
GWHAAZE00000008exon1328007213280142+
GWHAAZE00000008CDS1327837613278666+
GWHAAZE00000008CDS1327895113279035+
GWHAAZE00000008CDS1327985913279936+
GWHAAZE00000008CDS1328007213280142+
Transcript Sequence

Network for GWHGAAZE026990

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0214


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf23.219
SRR3591706second leaf49.703
SRR3591707mature leaf25.942
SRR3591708Shoot apex47.757
SRR3591709Stem26.993
SRR3591710White floral bud3.971
SRR3591711White flower2.871
SRR3591712Green floral bud5.104
SRR3591713Yellow flower0.597
SRP173429 SRR8316895Juvenile bud stage 8.424
SRR8316896Juvenile bud stage 9.402
SRR8316897Juvenile bud stage 3.690
SRR8316894Third green stage 5.064
SRR8316900Third green stage 9.731
SRR8316901Third green stage 8.944
SRR8316898Complete white stage 1.638
SRR8316899Complete white stage 16.173
SRR8316903Complete white stage 2.957
SRR8316902Silver flowering stage1.512
SRR8316904Silver flowering stage1.384
SRR8316905Silver flowering stage0.312
SRR8316906Gold flowering stage 0.556
SRR8316907Gold flowering stage 1.007
SRR8316908Gold flowering stage 1.206
SRP132670SRR6706286Control11.545
SRR6706287Light intensity 50%9.703
SRR6706288Light intensity 20%11.662
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.459
CNS0095593Slightly white alabastrum(diploid) 27.789
CNS0095594Slightly white alabastrum(diploid) 37.238
CNS0095595Whole white alabastrum(diploid) 29.043
CNS0095596Whole white alabastrum(diploid) 36.471
CNS0095597Whole white alabastrum(diploid) 46.196
CNS0095598Silvery flower (diploied) 117.496
CNS0095599Silvery flower (diploied) 216.208
CNS0095600Silvery flower (diploied) 35.561
CNS0095601Golden flower (diploid) 113.623
CNS0095602Golden flower (diploid) 26.556
CNS0095603Golden flower (diploid) 37.947
CNS0095604Slightly white alabastrum(tetraploid) 19.688
CNS0095605Slightly white alabastrum(tetraploid) 26.580
CNS0095606Slightly white alabastrum(tetraploid) 313.706
CNS0095607Whole white alabastrum(tetraploid) 17.849
CNS0095608Whole white alabastrum(tetraploid) 24.858
CNS0095609Whole white alabastrum(tetraploid) 36.820
CNS0095610Silvery flower (tetraploid) 13.370
CNS0095611Silvery flower (tetraploid) 28.697
CNS0095612Silvery flower (tetraploid) 34.734
CNS0095613Golden flower (tetraploid) 12.743
CNS0095614Golden flower (tetraploid) 23.285
CNS0095615Golden flower (tetraploid) 34.717
CRA001975CRR073297Stem 18.794
CRR073298Stem 211.627
CRR073299Stem 310.246
CRR073300Leaf 19.266
CRR073301Leaf 28.186
CRR073302Leaf 38.693
CRR073303Juvenile bud 16.617
CRR073304Juvenile bud 27.053
CRR073305Juvenile bud 36.500
CRR073306Third green 10.917
CRR073307Third green 20.857
CRR073308Third green 31.284
CRR073309Second white 11.774
CRR073310Second white 21.417
CRR073311Second white 30.452
CRR073312Silver flowering 10.871
CRR073313Silver flowering 20.122
CRR073314Silver flowering 31.084
CRR073315Gold flowering 122.652
CRR073316Gold flowering 228.666
CRR073317Gold flowering 324.986
CRR073318Tawny withering 124.497
CRR073319Tawny withering 219.859
CRR073320Tawny withering 322.439