Gene detail

Detail information of GWHGAAZE027004

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009605137.1	0	PREDICTED: heat shock protein 83 [Nicotiana tomentosiformis]
COG	YP_001530095.1	4E-140	heat shock protein 90
Swissprot	tr\|Q9STX5\|ENPL_ARATH	0	Endoplasmin homolog (Precursor)
trEMBL	tr\|F6HHM5\|F6HHM5_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB51721.1}
TAIR10	AT3G07770.1	0	HEAT SHOCK PROTEIN 89.1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	13451099	13463045	+
GWHAAZE00000008	mRNA	13451099	13463045	+
GWHAAZE00000008	exon	13451099	13451212	+
GWHAAZE00000008	exon	13452078	13452263	+
GWHAAZE00000008	exon	13452385	13452503	+
GWHAAZE00000008	exon	13457878	13458003	+
GWHAAZE00000008	exon	13458079	13458172	+
GWHAAZE00000008	exon	13458289	13458372	+
GWHAAZE00000008	exon	13458556	13458699	+
GWHAAZE00000008	exon	13458790	13458903	+
GWHAAZE00000008	exon	13459102	13459161	+
GWHAAZE00000008	exon	13459255	13459329	+
GWHAAZE00000008	exon	13459420	13459524	+
GWHAAZE00000008	exon	13459733	13459873	+
GWHAAZE00000008	exon	13459970	13460062	+
GWHAAZE00000008	exon	13460752	13461006	+
GWHAAZE00000008	exon	13461115	13461217	+
GWHAAZE00000008	exon	13461504	13461678	+
GWHAAZE00000008	exon	13461790	13461895	+
GWHAAZE00000008	exon	13462012	13462101	+
GWHAAZE00000008	exon	13462890	13463045	+
GWHAAZE00000008	CDS	13451099	13451212	+
GWHAAZE00000008	CDS	13452078	13452263	+
GWHAAZE00000008	CDS	13452385	13452503	+
GWHAAZE00000008	CDS	13457878	13458003	+
GWHAAZE00000008	CDS	13458079	13458172	+
GWHAAZE00000008	CDS	13458289	13458372	+
GWHAAZE00000008	CDS	13458556	13458699	+
GWHAAZE00000008	CDS	13458790	13458903	+
GWHAAZE00000008	CDS	13459102	13459161	+
GWHAAZE00000008	CDS	13459255	13459329	+
GWHAAZE00000008	CDS	13459420	13459524	+
GWHAAZE00000008	CDS	13459733	13459873	+
GWHAAZE00000008	CDS	13459970	13460062	+
GWHAAZE00000008	CDS	13460752	13461006	+
GWHAAZE00000008	CDS	13461115	13461217	+
GWHAAZE00000008	CDS	13461504	13461678	+
GWHAAZE00000008	CDS	13461790	13461895	+
GWHAAZE00000008	CDS	13462012	13462101	+
GWHAAZE00000008	CDS	13462890	13463045	+

Transcript Sequence
>GWHTAAZE027038 ATGCACAGGCTTTCGAGGCGTTCCGTTTCTGCTATACTGCGATACGGTGGTGCACGTTACAGAAATACTGCCCCTCCTCTTTCTTCTTTTTCTTCCAATCTCTTAAACGACTTGACAGGAGAGATTGATACCAAACTCAAGTGGTACTCTGTGTTAACTGCTGGGAGAGGTAATGACACTGGATCTGCTAAACCTCTCAACTTTAGGATAGAGAGGTCTCTAGGTGATCGATACGAATCTACAGCTGCAGCTTCTGATTCATCAGATCCACCAGCTGAGAAATATGAGTATCAAGCCGAGGTAAGTCGGCTCATGAACCTCATTGTCAACAGCCTATACAGCAACAAGGACGTCTTTCTTCGGGAGCTTATCAGGCATGTTTGGATTACCACTCAATCCCTTATCCATGTTTATTTACTCAATGCAAGCGATGCATTGGACAAGCTGCGGTTTCTTAGTGTTACGGAGCCTGAGCTTTCAAAAGATGGAGTTGATCTTGATATCCGCATCCAAACTGATAAAGATAATGGGATAGTTACTATAACGGACTCTGGCATTGGGATGACTCGCCAAGAACTTGTTGATTGTTTGGGAACTATTGCATCAAGTGGTACTGCAAAATTTTTGAAGGCTATGAAGGAGAGCAAGGATGGTGGAGCTGACAGCAATTTAATTGGTCAATTTGGTGTGGGATTTTATTCAGCTTTCTTAGTTTCTGATAGGGTGACTGTCTCAACAAAGAGCCCCAAATCTGATAAGCAATATGTATGGGAAGCAGAGGCCAACTCTAGCTCCTACACTATTCGAGAGGAGACTGACATTGAGAAGCTCCTACCTAGAGGGACCCGTCTCACATTATATCTCAAGCCTGAAGACAAAGGGTCTGCACATCCAGAAAGGATTGAGAAGCTTGTGAAAAACTATTCGCAGTTTGTTTCCTTCCCAATTTACATGTGGCAGGAAAAGGGTTGTACTAAGGAGGTTGAAGTTGATGAGGATCCAGCTGAAGCCAAGAAGGATGATCAGGATGGAAATGTTGAGAAGAAGAAGAAAACTAAGACTGTAGTTGAGAAGTACTGGGATTGGGAGCTCACTAATGAGACCCAGCCGATATGGCTTAGGAACCCAAAGGAAGTCACTACAGAGGAATATAATGAGTTCTACAGAAAGACTTTTAATGAATACCTGGATCCTCTAGCATCTTCACACTTTACAACGGAGGGTGAGGTGGAGTTCAGGTCAATACTCTATGTGCCATCTGTTTCTCCAATGGGGAAGGATGACATGGTCAATTCAAAAACAAAAAACATAAGGCTCTATGTTAAACGGGTGTTCATTTCAGATGATTTTGATGGAGAGTTGTTCCCACGATATTTGAGTTTCGTGAAAGGTGTTGTGGACTCAAATGACCTTCCCCTGAATGTTTCACGTGAAATTCTCCAGGAAAGTCGTATTGATTATGAGAAGTTCTGGGAGCATTTTGGCAAACACCTAAAACTGGGCTGCATTGAAGATCGTGAAAACCACAAGCGTCTTGCTCCACTACTTCGCTTTTTTTCTTCTCAAAGTGAGGAAGAGATGATCAGCTTGGATGAATATGTCGAGAACATGAAGCCTGAGCAGAAAGATATTTATTACATTGCTTCTGACAGTGTGACAAGTGCAAAGAATACACCCTTCCTAGAGAAGCTTCTTGAGAAGGATCTTGAAGTGCTGTTCTTAGTTGATCCCATTGATGAGATTGCCGTCCAGAATCTAAAATCGTATAAAGAGAAGAATTTTGTTGATATTAGCAAGGAAGACCTCGATTTAGGTGATAAGAATGAGGAGAAAGAAAAAGAGATGAAGCAGAACTTTGGCCAAACATGCGATTGGATAAAGAAACGGTTGGGTGACAAAGTTGCCAGCGTTCAAATCTCAAATCGTCTTAGCACATCGCCTTGTGTTCTTGCATCTGGGAAGTTTGGTTGGTCTGCCAACATGGAAAGGCTGATGAAGGCCCAGAGTGTTGGTGATACATCTAGCCTGGACTTCATGAGAGGCAGGAGAGTCTTTGAGATCAATCCTGAACACCCAATCATTAAAACCTTGGGTGCTGCATGCAAGAGTAGTCCAAATGATGAAGAAGCGTTGAGAGCTATTGATCTTTTGTACGACACAGCCTTGGTTTCTAGTGGTTTCACACCTGATAGTCCAGCACAGCTTGGTGGGAAGATCTATGAGATGATGGGCATGGCTCTTTCAGGCAAGTGGGCAGCGACTCCTCCTGGTGGGTTTCAGCAGCCAGAGACGCTAGAAGCAGAAGTTGTTGAGCCAGCTGAAGTTGGTTCTCATAAATGA

Network for GWHGAAZE027004

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02518.27	HATPase_c	136	291	5.60E-08
PF00183.19	HSP90	299	485	1.10E-72
PF00183.19	HSP90	486	750	8.80E-101

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K09487	HSP90B, TRA1	Protein processing in endoplasmic reticulum	map04141
		PI3K-Akt signaling pathway	map04151
		IL-17 signaling pathway	map04657
		Estrogen signaling pathway	map04915
		Thyroid hormone synthesis	map04918
		Plant-pathogen interaction	map04626

Gene Ontology

GO term	Ontology	Name
GO:0006457	biological_process	protein folding
GO:0005524	molecular_function	ATP binding
GO:0051082	molecular_function	unfolded protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	83.826
	SRR3591706	second leaf	38.004
	SRR3591707	mature leaf	31.434
	SRR3591708	Shoot apex	83.114
	SRR3591709	Stem	55.236
	SRR3591710	White floral bud	41.092
	SRR3591711	White flower	60.222
	SRR3591712	Green floral bud	58.003
	SRR3591713	Yellow flower	50.649
SRP173429	SRR8316895	Juvenile bud stage	34.153
	SRR8316896	Juvenile bud stage	46.756
	SRR8316897	Juvenile bud stage	25.887
	SRR8316894	Third green stage	20.090
	SRR8316900	Third green stage	48.210
	SRR8316901	Third green stage	41.594
	SRR8316898	Complete white stage	8.278
	SRR8316899	Complete white stage	39.617
	SRR8316903	Complete white stage	17.237
	SRR8316902	Silver flowering stage	12.330
	SRR8316904	Silver flowering stage	17.374
	SRR8316905	Silver flowering stage	8.251
	SRR8316906	Gold flowering stage	36.578
	SRR8316907	Gold flowering stage	33.523
	SRR8316908	Gold flowering stage	41.265
SRP132670	SRR6706286	Control	22.296
	SRR6706287	Light intensity 50%	24.699
	SRR6706288	Light intensity 20%	28.013
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	24.794
	CNS0095593	Slightly white alabastrum(diploid) 2	25.572
	CNS0095594	Slightly white alabastrum(diploid) 3	24.360
	CNS0095595	Whole white alabastrum(diploid) 2	20.812
	CNS0095596	Whole white alabastrum(diploid) 3	20.972
	CNS0095597	Whole white alabastrum(diploid) 4	17.177
	CNS0095598	Silvery flower (diploied) 1	41.828
	CNS0095599	Silvery flower (diploied) 2	28.123
	CNS0095600	Silvery flower (diploied) 3	33.889
	CNS0095601	Golden flower (diploid) 1	29.795
	CNS0095602	Golden flower (diploid) 2	36.211
	CNS0095603	Golden flower (diploid) 3	37.043
	CNS0095604	Slightly white alabastrum(tetraploid) 1	29.245
	CNS0095605	Slightly white alabastrum(tetraploid) 2	20.382
	CNS0095606	Slightly white alabastrum(tetraploid) 3	50.568
	CNS0095607	Whole white alabastrum(tetraploid) 1	13.248
	CNS0095608	Whole white alabastrum(tetraploid) 2	11.027
	CNS0095609	Whole white alabastrum(tetraploid) 3	34.824
	CNS0095610	Silvery flower (tetraploid) 1	42.239
	CNS0095611	Silvery flower (tetraploid) 2	45.694
	CNS0095612	Silvery flower (tetraploid) 3	40.210
	CNS0095613	Golden flower (tetraploid) 1	21.493
	CNS0095614	Golden flower (tetraploid) 2	36.116
	CNS0095615	Golden flower (tetraploid) 3	19.758
CRA001975	CRR073297	Stem 1	48.249
	CRR073298	Stem 2	43.548
	CRR073299	Stem 3	35.906
	CRR073300	Leaf 1	44.521
	CRR073301	Leaf 2	38.919
	CRR073302	Leaf 3	36.567
	CRR073303	Juvenile bud 1	36.946
	CRR073304	Juvenile bud 2	21.967
	CRR073305	Juvenile bud 3	39.159
	CRR073306	Third green 1	6.326
	CRR073307	Third green 2	3.758
	CRR073308	Third green 3	6.480
	CRR073309	Second white 1	16.961
	CRR073310	Second white 2	19.454
	CRR073311	Second white 3	18.418
	CRR073312	Silver flowering 1	12.284
	CRR073313	Silver flowering 2	18.190
	CRR073314	Silver flowering 3	13.717
	CRR073315	Gold flowering 1	20.173
	CRR073316	Gold flowering 2	36.882
	CRR073317	Gold flowering 3	20.116
	CRR073318	Tawny withering 1	27.992
	CRR073319	Tawny withering 2	29.073
	CRR073320	Tawny withering 3	28.311