Detail information of GWHGAAZE027035


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011100551.11.2404E-137PREDICTED: zinc finger protein CONSTANS-LIKE 9 [Sesamum indicum]
Swissprottr|Q9LUA9|COL10_ARATH7E-84Zinc finger protein CONSTANS-LIKE 10
trEMBLtr|A0A061DL86|A0A061DL86_THECC8E-124B-box type zinc finger protein with CCT domain isoform 1 {ECO:0000313|EMBL:EOX93574.1}
TAIR10AT5G48250.11E-56B-box type zinc finger protein with CCT domain

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1378822313790963-
GWHAAZE00000008mRNA1378822313790963-
GWHAAZE00000008exon1378822313788323-
GWHAAZE00000008exon1378877813789024-
GWHAAZE00000008exon1378964813789866-
GWHAAZE00000008exon1379042713790963-
GWHAAZE00000008CDS1379042713790963-
GWHAAZE00000008CDS1378964813789866-
GWHAAZE00000008CDS1378877813789024-
GWHAAZE00000008CDS1378822313788323-
Transcript Sequence

Network for GWHGAAZE027035

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF06203.15CCT3283572.90E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-CO-like

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf5.493
SRR3591706second leaf3.734
SRR3591707mature leaf0.879
SRR3591708Shoot apex8.215
SRR3591709Stem5.450
SRR3591710White floral bud23.625
SRR3591711White flower14.329
SRR3591712Green floral bud11.740
SRR3591713Yellow flower4.123
SRP173429 SRR8316895Juvenile bud stage 7.154
SRR8316896Juvenile bud stage 9.589
SRR8316897Juvenile bud stage 4.649
SRR8316894Third green stage 4.340
SRR8316900Third green stage 11.077
SRR8316901Third green stage 10.044
SRR8316898Complete white stage 14.031
SRR8316899Complete white stage 9.581
SRR8316903Complete white stage 22.366
SRR8316902Silver flowering stage5.831
SRR8316904Silver flowering stage10.891
SRR8316905Silver flowering stage3.945
SRR8316906Gold flowering stage 6.730
SRR8316907Gold flowering stage 6.519
SRR8316908Gold flowering stage 7.883
SRP132670SRR6706286Control8.413
SRR6706287Light intensity 50%9.040
SRR6706288Light intensity 20%8.807
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.910
CNS0095593Slightly white alabastrum(diploid) 24.645
CNS0095594Slightly white alabastrum(diploid) 37.083
CNS0095595Whole white alabastrum(diploid) 22.835
CNS0095596Whole white alabastrum(diploid) 33.840
CNS0095597Whole white alabastrum(diploid) 42.542
CNS0095598Silvery flower (diploied) 16.173
CNS0095599Silvery flower (diploied) 23.929
CNS0095600Silvery flower (diploied) 37.388
CNS0095601Golden flower (diploid) 13.669
CNS0095602Golden flower (diploid) 24.355
CNS0095603Golden flower (diploid) 32.708
CNS0095604Slightly white alabastrum(tetraploid) 17.472
CNS0095605Slightly white alabastrum(tetraploid) 27.751
CNS0095606Slightly white alabastrum(tetraploid) 36.874
CNS0095607Whole white alabastrum(tetraploid) 15.231
CNS0095608Whole white alabastrum(tetraploid) 22.633
CNS0095609Whole white alabastrum(tetraploid) 37.089
CNS0095610Silvery flower (tetraploid) 17.791
CNS0095611Silvery flower (tetraploid) 25.692
CNS0095612Silvery flower (tetraploid) 356.349
CNS0095613Golden flower (tetraploid) 11.385
CNS0095614Golden flower (tetraploid) 29.124
CNS0095615Golden flower (tetraploid) 33.002
CRA001975CRR073297Stem 125.106
CRR073298Stem 224.256
CRR073299Stem 320.072
CRR073300Leaf 126.832
CRR073301Leaf 225.911
CRR073302Leaf 316.579
CRR073303Juvenile bud 114.865
CRR073304Juvenile bud 230.793
CRR073305Juvenile bud 314.062
CRR073306Third green 127.944
CRR073307Third green 218.327
CRR073308Third green 329.457
CRR073309Second white 123.975
CRR073310Second white 234.410
CRR073311Second white 327.001
CRR073312Silver flowering 116.536
CRR073313Silver flowering 216.181
CRR073314Silver flowering 318.088
CRR073315Gold flowering 12.601
CRR073316Gold flowering 24.154
CRR073317Gold flowering 32.605
CRR073318Tawny withering 18.969
CRR073319Tawny withering 27.528
CRR073320Tawny withering 36.702