Gene detail

Detail information of GWHGAAZE027069

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011098110.1	5.5617E-159	PREDICTED: 2-oxoglutarate-dependent dioxygenase DAO-like [Sesamum indicum]
COG	YP_003277280.1	7E-24	2OG-Fe(II) oxygenase
Swissprot	tr\|Q7XKU5\|DAO_ORYSJ	7E-95	2-oxoglutarate-dependent dioxygenase DAO
trEMBL	tr\|A0A022QC34\|A0A022QC34_ERYGU	7E-157	Uncharacterized protein {ECO:0000313\|EMBL:EYU26232.1}
TAIR10	AT1G14130.1	6E-90	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	14295723	14297170	-
GWHAAZE00000008	mRNA	14295723	14297170	-
GWHAAZE00000008	exon	14295723	14296302	-
GWHAAZE00000008	exon	14296833	14297170	-
GWHAAZE00000008	CDS	14296833	14297170	-
GWHAAZE00000008	CDS	14295723	14296302	-

Transcript Sequence
>GWHTAAZE027103 ATGGCTAGTAATGGTTTGAATGTGCCAATAATTGATATGCATGAAAGTGAGGAGCTATCAGAGAAAATAGTGAAGGCGTGTGAGGAATGGGGATGCTTTAGGATACTTAACCATGGCATCCCGATGGCTCTCATGTCAGAAATGAAGGTGGTTGCCCGGTCATTGCTCGACCTTCCGGTGGAAATCAAGCTGCGAAATGCAAATCCAGTGCATGGAAAGGGCTACACACCACCCAACTGTGCGAGTCCTTTCTTTGAGGGTATGGGTGTTTATGACATGGCCTCTAATGGTGCTGTTGATGATTTTTGTGACCAGCTTGGTGCCTCTCCTCATCAAAGGGAGATTTTAACAAAATACTCTAGAGCTCTTTATGATCTTGCCCAAGATTTGGGTGGCAAATTGATGGAAGGCATGGGATTGGTGGGTGAATTGTACGAGGGATGGCCTTGCCAATTCAGATTGAACAAATACAATTATAGCCCACAAACTGTGGGCCTAACTGGTGCTGTTATGCACTCTGACCCTGGATTTTTAACCATATTACAAGATGATGAAATTTTTGGTGGATTGGAAGCTGTGAAAAAAGACACCGAGGAATTTGTACCCGTGGAACCCATGCCAGGCTCTCTTGTTGTCAATGTTGGAGATATTGCTAAAGTATGGAGCAATGGTAGATTTTGCAACGTAAAGCACAGAGTACAATGTTACGAAGCAGCAATCCGTATTTCGGTTGCTATATTTGTTTTAGGACCAAGGGACTCGAAAATTGAAGCACCTAAAGAACTTGTGGACTCTGAACACCCTCGTCTTTACGTTCCTTTCGATTTTGAAGAGTATAGAATGCTTCGAACTACTCTGAGAGCACCTACTGGTGGAGCTCTTGAGTCGTATTCAGTGTCACCAAATCTTGATAATTAA

Network for GWHGAAZE027069

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14226.7	DIOX_N	8	78	4.00E-15
PF03171.21	2OG-FeII_Oxy	151	248	4.00E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K23947	DAO	Tryptophan metabolism	map00380

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016491	molecular_function	oxidoreductase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.076
	SRR3591709	Stem	0.128
	SRR3591710	White floral bud	0.680
	SRR3591711	White flower	4.360
	SRR3591712	Green floral bud	0.226
	SRR3591713	Yellow flower	3.055
SRP173429	SRR8316895	Juvenile bud stage	0.256
	SRR8316896	Juvenile bud stage	0.653
	SRR8316897	Juvenile bud stage	0.234
	SRR8316894	Third green stage	0.064
	SRR8316900	Third green stage	0.079
	SRR8316901	Third green stage	0.136
	SRR8316898	Complete white stage	0.584
	SRR8316899	Complete white stage	0.101
	SRR8316903	Complete white stage	0.398
	SRR8316902	Silver flowering stage	2.168
	SRR8316904	Silver flowering stage	3.540
	SRR8316905	Silver flowering stage	1.436
	SRR8316906	Gold flowering stage	6.437
	SRR8316907	Gold flowering stage	2.319
	SRR8316908	Gold flowering stage	5.287
SRP132670	SRR6706286	Control	0.056
	SRR6706287	Light intensity 50%	0.072
	SRR6706288	Light intensity 20%	0.029
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.045
	CNS0095594	Slightly white alabastrum(diploid) 3	0.194
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.056
	CNS0095598	Silvery flower (diploied) 1	0.263
	CNS0095599	Silvery flower (diploied) 2	0.075
	CNS0095600	Silvery flower (diploied) 3	3.749
	CNS0095601	Golden flower (diploid) 1	0.559
	CNS0095602	Golden flower (diploid) 2	6.264
	CNS0095603	Golden flower (diploid) 3	6.606
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.007
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	8.096
	CNS0095611	Silvery flower (tetraploid) 2	4.690
	CNS0095612	Silvery flower (tetraploid) 3	37.250
	CNS0095613	Golden flower (tetraploid) 1	22.390
	CNS0095614	Golden flower (tetraploid) 2	8.616
	CNS0095615	Golden flower (tetraploid) 3	2.995
CRA001975	CRR073297	Stem 1	0.499
	CRR073298	Stem 2	0.270
	CRR073299	Stem 3	0.214
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.095
	CRR073302	Leaf 3	0.272
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	26.306
	CRR073307	Third green 2	16.356
	CRR073308	Third green 3	19.081
	CRR073309	Second white 1	7.076
	CRR073310	Second white 2	8.700
	CRR073311	Second white 3	8.352
	CRR073312	Silver flowering 1	3.655
	CRR073313	Silver flowering 2	2.710
	CRR073314	Silver flowering 3	4.741
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	18.086
	CRR073319	Tawny withering 2	49.531
	CRR073320	Tawny withering 3	0.000