Gene detail

Detail information of GWHGAAZE027070

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011098109.1	1.3902E-162	PREDICTED: 2-oxoglutarate-dependent dioxygenase DAO-like [Sesamum indicum]
COG	YP_003277280.1	2E-27	2OG-Fe(II) oxygenase
Swissprot	tr\|Q7XKU5\|DAO_ORYSJ	6E-116	2-oxoglutarate-dependent dioxygenase DAO
trEMBL	tr\|F6I0A4\|F6I0A4_VITVI	9E-157	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB60370.1}
TAIR10	AT1G14130.1	8E-101	2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	14314758	14317914	-
GWHAAZE00000008	mRNA	14314758	14317914	-
GWHAAZE00000008	exon	14314758	14315009	-
GWHAAZE00000008	exon	14315196	14315514	-
GWHAAZE00000008	exon	14317586	14317914	-
GWHAAZE00000008	CDS	14317586	14317914	-
GWHAAZE00000008	CDS	14315196	14315514	-
GWHAAZE00000008	CDS	14314758	14315009	-

Transcript Sequence
>GWHTAAZE027104 ATGACTCCAAATATTCCAGTAATTGATCTACAGGATTTTCCATCACAATCGAAGAAACTGATAGAAGCTTGTGAAGAACGGGGTTGTTTCAGGCTAATCAATCACTCGATACCAACTACTCTTATGTCGGAGATGAAATCGGCGGTGAGATTACTCCTGGATCTACCCATCGAAATTAAGCTGAGAAATACGGAGGTAATAGCCGGCAGTGGATATGTGGGGCTTAGTGAAGCAAATCCACTCTATGAAGGTTTGGGTCTTTATGATATTGGCTCCCCTGATGCTGTCCGTACCTTCTGTGATCAGCTTGATTCTTCTCCTCAACTAAGGGAAACAGTAGTGAAGTATTCTCAAGCAGTGCACGAGCTGGCCATGGATATTGGCCGAAAAATGGCTAAAAGTATGGGATTAGTTGATGATTTGTTCGACGGATGGCCTTGCCAATTCAGAATAAACAAATATCACTTCACCCCTGAATCCGTTGGCTCGTCCGGGGTTCAAATCCATACAGATTCAGGATTCCTAACCATATTACAGGATGATGAAAATGTTGGCGGGCTTGAGGTGATGGACAAGAACTCTGGCGAATTTATAGCCGTCGATCCCATGCCCAATACCCTCCTTGTCAATCTTGGAGACGTCGGAACGGTGTGGAGCAATGGGAGATTTTACAATGTGAAGCATCGAGTACAATGCAAAGAAGCAGCAATACGAGTGTCGATTGCTTTGTTTGTTTTAGGACCAAAAGTGGAGACCGTGGAAGCGCCGACTGAACTAGTGGATTCTGAACACCCTCGTCTTTATGTACCTTTTACTTTTGAAGATTACCGGAAGCTCCGGCTCTCTACCGGAATGCGGGCGGGTGAAGCTCTGTCGCTCTTACGCACTAACAAGCCCTAA

Network for GWHGAAZE027070

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14226.7	DIOX_N	5	74	9.50E-11
PF03171.21	2OG-FeII_Oxy	148	245	5.10E-19

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K23947	DAO	Tryptophan metabolism	map00380

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016491	molecular_function	oxidoreductase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.358
	SRR3591706	second leaf	8.176
	SRR3591707	mature leaf	5.665
	SRR3591708	Shoot apex	6.266
	SRR3591709	Stem	13.857
	SRR3591710	White floral bud	5.970
	SRR3591711	White flower	13.962
	SRR3591712	Green floral bud	8.469
	SRR3591713	Yellow flower	6.649
SRP173429	SRR8316895	Juvenile bud stage	7.046
	SRR8316896	Juvenile bud stage	11.598
	SRR8316897	Juvenile bud stage	8.608
	SRR8316894	Third green stage	4.215
	SRR8316900	Third green stage	5.725
	SRR8316901	Third green stage	7.125
	SRR8316898	Complete white stage	0.850
	SRR8316899	Complete white stage	3.768
	SRR8316903	Complete white stage	1.852
	SRR8316902	Silver flowering stage	0.422
	SRR8316904	Silver flowering stage	0.192
	SRR8316905	Silver flowering stage	0.309
	SRR8316906	Gold flowering stage	3.263
	SRR8316907	Gold flowering stage	0.547
	SRR8316908	Gold flowering stage	4.570
SRP132670	SRR6706286	Control	8.814
	SRR6706287	Light intensity 50%	9.208
	SRR6706288	Light intensity 20%	8.660
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	4.886
	CNS0095593	Slightly white alabastrum(diploid) 2	4.544
	CNS0095594	Slightly white alabastrum(diploid) 3	5.737
	CNS0095595	Whole white alabastrum(diploid) 2	3.274
	CNS0095596	Whole white alabastrum(diploid) 3	3.321
	CNS0095597	Whole white alabastrum(diploid) 4	3.503
	CNS0095598	Silvery flower (diploied) 1	3.666
	CNS0095599	Silvery flower (diploied) 2	4.396
	CNS0095600	Silvery flower (diploied) 3	4.750
	CNS0095601	Golden flower (diploid) 1	6.010
	CNS0095602	Golden flower (diploid) 2	3.663
	CNS0095603	Golden flower (diploid) 3	3.307
	CNS0095604	Slightly white alabastrum(tetraploid) 1	9.292
	CNS0095605	Slightly white alabastrum(tetraploid) 2	9.074
	CNS0095606	Slightly white alabastrum(tetraploid) 3	10.660
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.160
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.100
	CNS0095609	Whole white alabastrum(tetraploid) 3	15.771
	CNS0095610	Silvery flower (tetraploid) 1	8.337
	CNS0095611	Silvery flower (tetraploid) 2	12.442
	CNS0095612	Silvery flower (tetraploid) 3	9.290
	CNS0095613	Golden flower (tetraploid) 1	9.100
	CNS0095614	Golden flower (tetraploid) 2	17.088
	CNS0095615	Golden flower (tetraploid) 3	7.069
CRA001975	CRR073297	Stem 1	12.657
	CRR073298	Stem 2	16.752
	CRR073299	Stem 3	14.525
	CRR073300	Leaf 1	6.845
	CRR073301	Leaf 2	8.751
	CRR073302	Leaf 3	10.080
	CRR073303	Juvenile bud 1	4.750
	CRR073304	Juvenile bud 2	5.027
	CRR073305	Juvenile bud 3	2.740
	CRR073306	Third green 1	2.732
	CRR073307	Third green 2	2.034
	CRR073308	Third green 3	2.766
	CRR073309	Second white 1	0.704
	CRR073310	Second white 2	1.678
	CRR073311	Second white 3	0.056
	CRR073312	Silver flowering 1	0.052
	CRR073313	Silver flowering 2	1.481
	CRR073314	Silver flowering 3	0.739
	CRR073315	Gold flowering 1	1.721
	CRR073316	Gold flowering 2	1.541
	CRR073317	Gold flowering 3	1.575
	CRR073318	Tawny withering 1	6.849
	CRR073319	Tawny withering 2	4.989
	CRR073320	Tawny withering 3	4.659