Gene detail

Detail information of GWHGAAZE027115

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AAF27931.1AF222805_1	7.4941E-164	14-3-3-like protein [Euphorbia esula]
Swissprot	tr\|Q96453\|1433D_SOYBN	1E-158	14-3-3-like protein D
trEMBL	tr\|Q9M5W3\|Q9M5W3_EUPES	3E-164	14-3-3-like protein {ECO:0000313\|EMBL:AAF27931.1}
TAIR10	AT2G42590.3	7E-117	general regulatory factor 9

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	14935564	14938233	+
GWHAAZE00000008	mRNA	14935564	14938233	+
GWHAAZE00000008	exon	14935564	14935639	+
GWHAAZE00000008	exon	14936287	14936593	+
GWHAAZE00000008	exon	14936700	14936787	+
GWHAAZE00000008	exon	14937814	14937923	+
GWHAAZE00000008	exon	14938062	14938233	+
GWHAAZE00000008	CDS	14935564	14935639	+
GWHAAZE00000008	CDS	14936287	14936593	+
GWHAAZE00000008	CDS	14936700	14936787	+
GWHAAZE00000008	CDS	14937814	14937923	+
GWHAAZE00000008	CDS	14938062	14938233	+

Transcript Sequence
>GWHTAAZE027149 ATGGCCTCCTCCTCCTCCGAACGCGAAAACTTCGTCTACATCGCCAAGCTCGCTGAGCAAGCCGAACGCTATGATGAAATGGTGGAATCGATGAAGAATGTAGCAAAGCTTGATGTGGAATTGACTATTGAGGAGCGGAACTTGCTCTCCGTTGGGTACAAGAACGTGGTTGGTTCTCGTAGGGCATCGTGGAGGATCTTGTCTTCGATCGAGCAGAAGGAGGAGTCGAAAGGAAACGAAGTGAACGCCAAGCGGATCAGGGAGTACAGGCAGAAAGTGGAATCGGAGCTATCTAGCATCTGCAGTGATATCATGACTGTAATTGATGAGCATCTAATTCCCTCGTGTTCCGGTGGAGAGTCCACTGTTTTCTACTACAAAATGAAAGGGGACTATTACAGGTACCTTGCAGAGTTCAAGTCTGGTAATGACAAGAAAGAGGCTGCTGATCAGTCACTCAAGGCGTATCAGCTGGCTTCTACTACTGCAGAGAACGACTTATCTCCCACTCACCCAATCCGACTGGGCTTGGCTTTGAACTTTTCAGTCTTCTATTATGAGATTATCAACTCACCAGAAAGGGCGTGCCACCTTGCAAAACAAGCTTTTGATGAAGCTATCTCCGAGCTGGATAGCCTGAGTGAGGAATCTTACAAAGATAGCACTTTAATTATGCAACTTTTGAGGGACAACCTCACTTTGTGGACTTCCGACATCCCTGAGGATGGAGGTATTTTACATATTTCCACTTGA

Network for GWHGAAZE027115

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00244.21	2014/3/3	15	236	4.50E-106

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K06630	YWHAE	MAPK signaling pathway - yeast	map04011
		Hippo signaling pathway	map04390
		Hippo signaling pathway - fly	map04391
		PI3K-Akt signaling pathway	map04151
		Cell cycle	map04110
		Oocyte meiosis	map04114
		NOD-like receptor signaling pathway	map04621
		Neurotrophin signaling pathway	map04722

Gene Ontology

GO term	Ontology	Name
GO:0019904	molecular_function	protein domain specific binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	324.918
	SRR3591706	second leaf	183.350
	SRR3591707	mature leaf	172.694
	SRR3591708	Shoot apex	295.349
	SRR3591709	Stem	293.695
	SRR3591710	White floral bud	162.631
	SRR3591711	White flower	99.108
	SRR3591712	Green floral bud	176.031
	SRR3591713	Yellow flower	51.715
SRP173429	SRR8316895	Juvenile bud stage	122.982
	SRR8316896	Juvenile bud stage	142.469
	SRR8316897	Juvenile bud stage	100.792
	SRR8316894	Third green stage	80.001
	SRR8316900	Third green stage	226.899
	SRR8316901	Third green stage	233.830
	SRR8316898	Complete white stage	122.159
	SRR8316899	Complete white stage	348.671
	SRR8316903	Complete white stage	167.853
	SRR8316902	Silver flowering stage	36.782
	SRR8316904	Silver flowering stage	43.340
	SRR8316905	Silver flowering stage	26.471
	SRR8316906	Gold flowering stage	65.251
	SRR8316907	Gold flowering stage	65.906
	SRR8316908	Gold flowering stage	85.694
SRP132670	SRR6706286	Control	395.728
	SRR6706287	Light intensity 50%	386.131
	SRR6706288	Light intensity 20%	429.524
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	145.865
	CNS0095593	Slightly white alabastrum(diploid) 2	173.366
	CNS0095594	Slightly white alabastrum(diploid) 3	118.321
	CNS0095595	Whole white alabastrum(diploid) 2	136.823
	CNS0095596	Whole white alabastrum(diploid) 3	130.597
	CNS0095597	Whole white alabastrum(diploid) 4	121.073
	CNS0095598	Silvery flower (diploied) 1	177.907
	CNS0095599	Silvery flower (diploied) 2	166.368
	CNS0095600	Silvery flower (diploied) 3	163.750
	CNS0095601	Golden flower (diploid) 1	197.475
	CNS0095602	Golden flower (diploid) 2	198.743
	CNS0095603	Golden flower (diploid) 3	192.193
	CNS0095604	Slightly white alabastrum(tetraploid) 1	153.399
	CNS0095605	Slightly white alabastrum(tetraploid) 2	131.435
	CNS0095606	Slightly white alabastrum(tetraploid) 3	255.072
	CNS0095607	Whole white alabastrum(tetraploid) 1	95.492
	CNS0095608	Whole white alabastrum(tetraploid) 2	71.145
	CNS0095609	Whole white alabastrum(tetraploid) 3	171.782
	CNS0095610	Silvery flower (tetraploid) 1	94.385
	CNS0095611	Silvery flower (tetraploid) 2	133.148
	CNS0095612	Silvery flower (tetraploid) 3	77.326
	CNS0095613	Golden flower (tetraploid) 1	72.329
	CNS0095614	Golden flower (tetraploid) 2	78.232
	CNS0095615	Golden flower (tetraploid) 3	66.866
CRA001975	CRR073297	Stem 1	362.447
	CRR073298	Stem 2	339.208
	CRR073299	Stem 3	372.361
	CRR073300	Leaf 1	394.620
	CRR073301	Leaf 2	400.487
	CRR073302	Leaf 3	505.285
	CRR073303	Juvenile bud 1	390.715
	CRR073304	Juvenile bud 2	446.371
	CRR073305	Juvenile bud 3	363.813
	CRR073306	Third green 1	131.309
	CRR073307	Third green 2	150.919
	CRR073308	Third green 3	128.591
	CRR073309	Second white 1	89.514
	CRR073310	Second white 2	48.301
	CRR073311	Second white 3	25.127
	CRR073312	Silver flowering 1	20.266
	CRR073313	Silver flowering 2	37.994
	CRR073314	Silver flowering 3	18.258
	CRR073315	Gold flowering 1	202.948
	CRR073316	Gold flowering 2	202.418
	CRR073317	Gold flowering 3	187.925
	CRR073318	Tawny withering 1	286.705
	CRR073319	Tawny withering 2	212.195
	CRR073320	Tawny withering 3	267.776