Detail information of GWHGAAZE027165


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI20305.30unnamed protein product [Vitis vinifera]
COGYP_008431896.11E-58ATPase AAA
Swissprottr|Q9M0Y8|NSF_ARATH0Vesicle-fusing ATPase
trEMBLtr|E0CSK6|E0CSK6_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI20305.3}
TAIR10AT4G04910.10AAA-type ATPase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1560858215617309-
GWHAAZE00000008mRNA1560858215617309-
GWHAAZE00000008exon1561718415617309-
GWHAAZE00000008exon1561615215616255-
GWHAAZE00000008exon1561598915616070-
GWHAAZE00000008exon1561571115615761-
GWHAAZE00000008exon1561535015615520-
GWHAAZE00000008exon1561506315615217-
GWHAAZE00000008exon1561485915614967-
GWHAAZE00000008exon1561432015614419-
GWHAAZE00000008exon1561418915614244-
GWHAAZE00000008exon1561392815613993-
GWHAAZE00000008exon1561374815613830-
GWHAAZE00000008exon1561351115613644-
GWHAAZE00000008exon1561163015611840-
GWHAAZE00000008exon1561106915611200-
GWHAAZE00000008exon1561092415610984-
GWHAAZE00000008exon1561077015610829-
GWHAAZE00000008exon1561055915610617-
GWHAAZE00000008exon1561039015610477-
GWHAAZE00000008exon1560971115609833-
GWHAAZE00000008exon1560925515609320-
GWHAAZE00000008exon1560858215608725-
GWHAAZE00000008CDS1561718415617309-
GWHAAZE00000008CDS1561615215616255-
GWHAAZE00000008CDS1561598915616070-
GWHAAZE00000008CDS1561571115615761-
GWHAAZE00000008CDS1561535015615520-
GWHAAZE00000008CDS1561506315615217-
GWHAAZE00000008CDS1561485915614967-
GWHAAZE00000008CDS1561432015614419-
GWHAAZE00000008CDS1561418915614244-
GWHAAZE00000008CDS1561392815613993-
GWHAAZE00000008CDS1561374815613830-
GWHAAZE00000008CDS1561351115613644-
GWHAAZE00000008CDS1561163015611840-
GWHAAZE00000008CDS1561106915611200-
GWHAAZE00000008CDS1561092415610984-
GWHAAZE00000008CDS1561077015610829-
GWHAAZE00000008CDS1561055915610617-
GWHAAZE00000008CDS1561039015610477-
GWHAAZE00000008CDS1560971115609833-
GWHAAZE00000008CDS1560925515609320-
GWHAAZE00000008CDS1560858215608725-
Transcript Sequence

Network for GWHGAAZE027165

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00004.30AAA2393791.20E-39
PF17862.2AAA_lid_34064617.90E-11
PF00004.30AAA5206342.00E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06027NSF, SEC18 Autophagy - yeast map04138
Vasopressin-regulated water reabsorptionmap04962
GABAergic synapsemap04727
Synaptic vesicle cyclemap04721

Gene Ontology

GO term OntologyName
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf37.429
SRR3591706second leaf17.925
SRR3591707mature leaf9.983
SRR3591708Shoot apex15.047
SRR3591709Stem31.004
SRR3591710White floral bud29.540
SRR3591711White flower27.505
SRR3591712Green floral bud36.883
SRR3591713Yellow flower23.827
SRP173429 SRR8316895Juvenile bud stage 18.457
SRR8316896Juvenile bud stage 30.828
SRR8316897Juvenile bud stage 14.383
SRR8316894Third green stage 11.425
SRR8316900Third green stage 34.971
SRR8316901Third green stage 33.023
SRR8316898Complete white stage 7.950
SRR8316899Complete white stage 24.537
SRR8316903Complete white stage 18.342
SRR8316902Silver flowering stage8.939
SRR8316904Silver flowering stage13.275
SRR8316905Silver flowering stage5.310
SRR8316906Gold flowering stage 18.175
SRR8316907Gold flowering stage 19.985
SRR8316908Gold flowering stage 20.035
SRP132670SRR6706286Control16.157
SRR6706287Light intensity 50%18.414
SRR6706288Light intensity 20%18.825
CNP0000432CNS0095592Slightly white alabastrum(diploid) 123.760
CNS0095593Slightly white alabastrum(diploid) 219.459
CNS0095594Slightly white alabastrum(diploid) 320.716
CNS0095595Whole white alabastrum(diploid) 218.755
CNS0095596Whole white alabastrum(diploid) 319.895
CNS0095597Whole white alabastrum(diploid) 415.307
CNS0095598Silvery flower (diploied) 114.364
CNS0095599Silvery flower (diploied) 214.255
CNS0095600Silvery flower (diploied) 318.694
CNS0095601Golden flower (diploid) 19.580
CNS0095602Golden flower (diploid) 215.570
CNS0095603Golden flower (diploid) 313.624
CNS0095604Slightly white alabastrum(tetraploid) 127.678
CNS0095605Slightly white alabastrum(tetraploid) 221.465
CNS0095606Slightly white alabastrum(tetraploid) 330.693
CNS0095607Whole white alabastrum(tetraploid) 117.721
CNS0095608Whole white alabastrum(tetraploid) 221.598
CNS0095609Whole white alabastrum(tetraploid) 335.566
CNS0095610Silvery flower (tetraploid) 126.410
CNS0095611Silvery flower (tetraploid) 219.328
CNS0095612Silvery flower (tetraploid) 318.206
CNS0095613Golden flower (tetraploid) 112.573
CNS0095614Golden flower (tetraploid) 218.868
CNS0095615Golden flower (tetraploid) 313.403
CRA001975CRR073297Stem 123.214
CRR073298Stem 219.457
CRR073299Stem 317.538
CRR073300Leaf 122.675
CRR073301Leaf 221.748
CRR073302Leaf 319.985
CRR073303Juvenile bud 122.843
CRR073304Juvenile bud 215.039
CRR073305Juvenile bud 322.125
CRR073306Third green 14.604
CRR073307Third green 25.233
CRR073308Third green 36.547
CRR073309Second white 110.701
CRR073310Second white 212.351
CRR073311Second white 310.658
CRR073312Silver flowering 19.022
CRR073313Silver flowering 212.310
CRR073314Silver flowering 311.996
CRR073315Gold flowering 17.744
CRR073316Gold flowering 211.924
CRR073317Gold flowering 36.751
CRR073318Tawny withering 113.882
CRR073319Tawny withering 215.947
CRR073320Tawny withering 320.982